Construct: ORF TRCN0000466693
Construct Description:
- Construct Type:
- ORF
- Other Identifiers:
- ORF017371.1_s317c1
- Derived from:
- ccsbBroadEn_03408
- DNA Barcode:
- GGACAATCAATGTACAAGGCACCC
- Epitope Tag:
- V5
- Notes:
- No stop codon in insert
Originally Annotated References:
- Gene:
- GNG2 (54331)
Vector Information:
- Vector Backbone:
- pLX_317
- Pol II Cassette 1:
- SV40-PuroR
- Pol II Cassette 2:
- EF1a-TRCN0000466693
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
- Epitope Tag:
- V5
Current transcripts matched by this ORF:
| Taxon | Gene | Symbol | Description | Transcript | Nuc. Match %[?]A simple nucleotide-based global alignment percentage, calculated as follows: total nt. matches ---------------------------------- aligned length (incl. gaps) |
Prot. Match %[?]A simple amino acid-based global alignment percentage, calculated as follows: total aa. matches ---------------------------------- aligned length (incl. gaps) |
Match Diffs[?]This field may contain sequence annotations in HGVS format. For more information about HGVS annotations, please refer to the HGVS Quick Reference Guide. | |
|---|---|---|---|---|---|---|---|---|
| 1 | human | 54331 | GNG2 | G protein subunit gamma 2 | NM_001243773.2 | 100% | 100% | |
| 2 | human | 54331 | GNG2 | G protein subunit gamma 2 | NM_001243774.2 | 100% | 100% | |
| 3 | human | 54331 | GNG2 | G protein subunit gamma 2 | NM_053064.5 | 100% | 100% | |
| 4 | human | 54331 | GNG2 | G protein subunit gamma 2 | XM_006720173.2 | 100% | 100% | |
| 5 | human | 54331 | GNG2 | G protein subunit gamma 2 | XM_011536846.2 | 100% | 100% | |
| 6 | human | 54331 | GNG2 | G protein subunit gamma 2 | XM_017021376.2 | 100% | 100% | |
| 7 | human | 54331 | GNG2 | G protein subunit gamma 2 | XM_017021377.1 | 100% | 100% | |
| 8 | human | 54331 | GNG2 | G protein subunit gamma 2 | XM_024449630.1 | 100% | 100% | |
| 9 | human | 54331 | GNG2 | G protein subunit gamma 2 | XM_024449631.1 | 100% | 100% | |
| 10 | human | 54331 | GNG2 | G protein subunit gamma 2 | XM_024449632.1 | 100% | 100% | |
| 11 | human | 54331 | GNG2 | G protein subunit gamma 2 | XM_024449633.1 | 100% | 100% | |
| 12 | human | 54331 | GNG2 | G protein subunit gamma 2 | XM_024449634.1 | 100% | 100% | |
| 13 | human | 54331 | GNG2 | G protein subunit gamma 2 | XM_024449629.1 | 87.6% | 87.6% | 1_30del |
| 14 | mouse | 14702 | Gng2 | guanine nucleotide binding ... | NM_001038637.1 | 92.4% | 100% | (many diffs) |
| 15 | mouse | 14702 | Gng2 | guanine nucleotide binding ... | NM_001285908.1 | 92.4% | 100% | (many diffs) |
| 16 | mouse | 14702 | Gng2 | guanine nucleotide binding ... | NM_001285909.1 | 92.4% | 100% | (many diffs) |
| 17 | mouse | 14702 | Gng2 | guanine nucleotide binding ... | NM_001285910.1 | 92.4% | 100% | (many diffs) |
| 18 | mouse | 14702 | Gng2 | guanine nucleotide binding ... | NM_001285911.1 | 92.4% | 100% | (many diffs) |
| 19 | mouse | 14702 | Gng2 | guanine nucleotide binding ... | NM_010315.4 | 92.4% | 100% | (many diffs) |
Sequence Information
Note: uppercase bases indicate empirically verified sequence.
- ORF start:
- 90
- ORF end:
- 303
- ORF length:
- 213
- Sequence:
-
1 TCAGACAGTG GTTCAAAGTT TTTTTCTTCC ATTTCAGGTG TCGTGAGGCT AGCATCGATT 61 GATCAACAAG TTTGTACAAA AAAGTTGGCA TGGCCAGCAA CAACACCGCC AGCATAGCAC 121 AAGCCAGGAA GCTGGTAGAG CAGCTTAAGA TGGAAGCCAA TATCGACAGG ATAAAGGTGT 181 CCAAGGCAGC TGCAGATTTG ATGGCCTACT GTGAAGCACA TGCCAAGGAA GACCCCCTCC 241 TGACCCCTGT TCCGGCTTCA GAAAACCCGT TTAGGGAGAA GAAGTTTTTC TGTGCCATCC 301 TTTACCCAAC TTTCTTGTAC AAAGTGGTTG ATATCGGTAA GCCTATCCCT AACCCTCTCC 361 TCGGTCTCGA TTCTACGTAG TAATGAACTA GTCCGTAACT TGAAAGTATT TCGATTTCTT 421 GGCTTTATAT ATCTTGTGGA AAGGACGAGG ACAATCAATG TACAAGGCAC CCACGCGTTA 481 AGTCgacaat caacctctgg attacaaaat ttgtgaaaga tt