Construct: ORF TRCN0000468365

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF011426.1_s317c1
Derived from:
ccsbBroadEn_09357
DNA Barcode:
CCGTCTTACGCATTTGTGTCGCAC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
MYL10 (93408)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000468365
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 93408 MYL10 myosin light chain 10 NM_138403.5 99.8% 100% 603A>G
2 human 93408 MYL10 myosin light chain 10 XM_017012793.1 64.8% 65% 0_1ins135;36_37ins102;366A>G
3 mouse 59310 Myl10 myosin, light chain 10, reg... XM_017321052.1 59.7% 60.1% (many diffs)
4 mouse 59310 Myl10 myosin, light chain 10, reg... XM_017321050.1 59% 51.9% (many diffs)
5 mouse 59310 Myl10 myosin, light chain 10, reg... NM_021611.3 57.7% 64.6% (many diffs)
6 mouse 59310 Myl10 myosin, light chain 10, reg... NM_001085387.2 51.2% 57.5% (many diffs)
7 mouse 59310 Myl10 myosin, light chain 10, reg... NM_001303021.1 51.2% 57.5% (many diffs)
8 mouse 59310 Myl10 myosin, light chain 10, reg... NM_001303019.1 36.2% 31.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
744
ORF length:
678
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgtt gcttaggctg gtctcaaact cctggcctca agtgatcctc cctcctcggc
121ctcccaaagt gctgggatta caggcaccga gaagagctcg gaaaagagca gaaggcaccg
181ccagctccaa cgtcttctcc atgtttgatc agtcccagat ccaggagttt aaagagagtc
241tggctctgtc gcccaggctg gagcgcaatg gcatgatctc ggctcactgc aacctctgcc
301tcacgggttc aagcaattct cctgcctcag cctccCAAGC TTTCACCATC ATGGACCAGA
361ACCGTGATGG CTTCATCGAC AAAGAGGACT TGAGGGACAC CTTTGCCGCG CTGGGCCGCA
421TCAATGTCAA GAACGAGGAA CTGGAGGCCA TGGTGAAGGA GGCCCCCGGA CCCATCAACT
481TCACGGTGTT CCTGACCATG TTTGGGGAGA AGCTGAAGGG CACGGACCCA GAGGAGACCA
541TTCTCCACGC CTTCAAAGTG TTCGACACTG AAGGGAAAGG TTTCGTCAAG GCCGATGTCA
601TCAAAGAAAA ACTTATGACC CAGGCAGACC GCTTCAGTGA GGAGGAGGTC AAGCAGATGT
661TTGCAGCGTT TCCCCCAGAT GTGTGCGGCA ACCTGGACTA CAGAAACCTG TGCTACGTCA
721TCACTCACGG TGAAGAGAAG GATTACCCAA CTTTCTTGTA CAAAGTGGTT GATATCGGTA
781AGCCTATCCC TAACCCTCTC CTCGGTCTCG ATTCTACGTA GTAATGAACT AGTCCGTAAC
841TTGAAAGTAT TTCGATTTCT TGGCTTTATA TATCTTGTGG AAAGGACGAC CGTCTTACGC
901ATTTGTGTCG CACACGCGTT AAGTCgacaa tcaacctctg gattacaaaa tttgtgaaag
961att

Download FASTA (ORF) (Full)