Construct: ORF TRCN0000468383

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF012716.1_s317c1
Derived from:
ccsbBroadEn_06646
DNA Barcode:
CCCCTCCCAATTCCCCGTTAGACG
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
NNMT (4837)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000468383
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 4837 NNMT nicotinamide N-methyltransf... NM_001372045.1 99.8% 99.6% 20C>G
2 human 4837 NNMT nicotinamide N-methyltransf... NM_001372046.1 99.8% 99.6% 20C>G
3 human 4837 NNMT nicotinamide N-methyltransf... NM_001372047.1 99.8% 99.6% 20C>G
4 human 4837 NNMT nicotinamide N-methyltransf... NM_006169.3 99.8% 99.6% 20C>G
5 human 4837 NNMT nicotinamide N-methyltransf... NR_164073.1 35.1% (many diffs)
6 mouse 18113 Nnmt nicotinamide N-methyltransf... NM_001311062.1 50.7% 47.3% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
67
ORF end:
859
ORF length:
792
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaatgg aatcaggctt cacctgcaag gacacctatc taagccattt taaccctcgg
121gattacctag aaaaatatta caagtttggt tctaggcact ctgcagaaag ccagattctt
181aagcaccttc tgaaaaatct tttcaagata ttctgcctag acggtgtgaa gggagacctg
241ctgattgaca tcggctctgg ccccactatc tatcagctcc tctctgcttg tgaatccttt
301aaggagatcg tcgtcactga ctactcagac cagaacctgc aggagctgga gaagtggctg
361aagaaagagc cagaggcctt tgactggtcc ccagtggtga cctatgtgtg tgatcttGAA
421GGGAACAGAG TCAAGGGTCC AGAGAAGGAG GAGAAGTTGA GACAGGCGGT CAAGCAGGTG
481CTGAAGTGTG ATGTGACTCA GAGCCAGCCA CTGGGGGCCG TCCCCTTACC CCCGGCTGAC
541TGCGTGCTCA GCACACTGTG TCTGGATGCC GCCTGCCCAG ACCTCCCCAC CTACTGCAGG
601GCGCTCAGGA ACCTCGGCAG CCTACTGAAG CCAGGGGGCT TCCTGGTGAT CATGGATGCG
661CTCAAGAGCA GCTACTACAT GATTGGTGAG CAGAAGTTCT CCAGCCTCCC CCTGGGCCGG
721GAGGCAGTAG AGGCTGCTGT GAAAGAGGCT GGCTACACAA TCGAATGGTT TGAGGTGATC
781TCGCAAAGTT ATTCTTCCAC CATGGCCAAC AACGAAGGAC TTTTCTCCCT GGTGGCGAGG
841AAGCTGAGCA GACCCCTGTG CCCAACTTTC TTGTACAAAG TGGTTGATAT CGGTAAGCCT
901ATCCCTAACC CTCTCCTCGG TCTCGATTCT ACGTAGTAAT GAACTAGTCC GTAACTTGAA
961AGTATTTCGA TTTCTTGGCT TTATATATCT TGTGGAAAGG ACGACCCCTC CCAATTCCCC
1021GTTAGACGAC GCGTTAAGTC gacaatcaac ctctggatta caaaatttgt gaaagatt

Download FASTA (ORF) (Full)