Construct: ORF TRCN0000468761

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014381.1_s317c1
Derived from:
ccsbBroadEn_01678
DNA Barcode:
GAATCCTTATGTGCAATCTACGTT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TLR1 (7096)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000468761
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 7096 TLR1 toll like receptor 1 NM_003263.4 100% 100%
2 human 7096 TLR1 toll like receptor 1 XM_005262662.5 100% 100%
3 human 7096 TLR1 toll like receptor 1 XM_011513742.3 100% 100%
4 human 7096 TLR1 toll like receptor 1 XM_011513745.3 100% 100%
5 human 7096 TLR1 toll like receptor 1 XM_017008571.2 100% 100%
6 human 7096 TLR1 toll like receptor 1 XM_017008572.2 100% 100%
7 human 7096 TLR1 toll like receptor 1 XM_024454196.1 100% 100%
8 human 7096 TLR1 toll like receptor 1 XM_024454197.1 100% 100%
9 human 7096 TLR1 toll like receptor 1 XM_024454198.1 100% 100%
10 human 7096 TLR1 toll like receptor 1 XR_925165.2 80.9% 1_274del;2633_2912del
11 human 7096 TLR1 toll like receptor 1 XR_925163.2 41.4% 1_274del;2633_5689del
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
2427
ORF length:
2358
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat gactagcatc ttccattttg ccattatctt catgttaata cttcagatca
121gaatacaatt atctgaagaa agtgaatttt tagttgatag gtcaaaaaac ggtctcatcc
181acgttcctaa agacctatcc cagaaaacaa caatcttaaa tatatcgcaa aattatatat
241ctgagctttg gacttctgac atcttatcac tgtcaaaact gaggattttg ataatttctc
301ataatagaat ccagtatctt gatatcagtg ttttcaaatt caaccaggaa ttggaatact
361tggatttgtc ccacaacaag ttggtgaaga tttcttgcca ccctactgtg aacctcaagc
421acttggacct gtcatttaat gcatttgatg ccctgcctat atgcaaagag tttggcaata
481tgtctcaact aaaatttctg gggttgagca ccacacactt agaaaaatct agtgtgctgc
541caattgctca tttgaatatc agcaaggtct tgctggtctt aggagagact tatggggaaa
601aagaagaccc tgagggcctt caagacttta acactgagag tctgcacatt gtgttcccca
661caaacaaaga attccatttt attttggatg tgtcagtcaa gactgtagca aatctggaac
721tatctaatat caaatgtgtg ctagaagata acaaatgttc ttacttccta agtattctgg
781cgaaacttca aacaaatcca aagttatcaa atcttacctt aaacaacatt gaaacaactt
841ggaattcttt cattaggatc ctccagctgg tttggcatac aactgtatgg tatttctcaa
901tttcaaacgt gaagctacag ggtcagctgg acttcagaga ttttgattat tctggcactt
961ccttgaaggc cttgtctata caccaagttg tcagcgatgt gttcggtttt ccgcaaagtt
1021atatctatga aatcttttcg aatatgaaca tcaaaaattt cacagtgtct ggtacacgca
1081tggtccacat gctttgccca tccaaaatta gcccgttcct gcatttggat ttttccaata
1141atctcttaac agacacggtt tttgaaaatt gtgggcacct tactgagttg gagacactta
1201ttttacaaat gaatcaatta aaagaacttt caaaaatagc tgaaatgact acacagatga
1261agtctctgca acaattggat attagccaga attctgtaag ctatgatgaa aagaaaggag
1321actgttcttg gactaaaagt ttattaagtt taaatatgtc ttcaaatata cttactgaca
1381ctattttcag atgtttacct cccaggatca aggtacttga tcttcacagc aataaaataa
1441agagcattcc taaacaagtc gtaaaactgg aagctttgca agaactcaat gttgctttca
1501attctttaac tgaccttcct ggatgtggca gctttagcag cctttctgta ttgatcattg
1561atcacaattc agtttcccac ccatcggctg atttcttcca gagctgccag aagatgaggt
1621caataaaagc aggggacaat ccattccaat gtacctgtga gctaggagaa tttgtcaaaa
1681atatagacca agtatcaagt gaagtgttag agggctggcc tgattcttat aagtgtgact
1741acccggaaag ttatagagga accctactaa aggactttca catgtctgaa ttatcctgca
1801acataactct gctgatcgtc accatcgttg ccaccatgct ggtgttggct gtgactgtga
1861cctccctctg cagctacttg gatctgccct ggtatctcag gatggtgtgc cagtggaccc
1921agacccggcg cagggccagg aacatacccT TAGAAGAACT CCAAAGAAAT CTCCAGTTTC
1981ATGCATTTAT TTCATATAGT GGGCACGATT CTTTCTGGGT GAAGAATGAA TTATTGCCAA
2041ACCTAGAGAA AGAAGGTATG CAGATTTGCC TTCATGAGAG AAACTTTGTT CCTGGCAAGA
2101GCATTGTGGA AAATATCATC ACCTGCATTG AGAAGAGTTA CAAGTCCATC TTTGTTTTGT
2161CTCCCAACTT TGTCCAGAGT GAATGGTGCC ATTATGAACT CTACTTTGCC CATCACAATC
2221TCTTTCATGA AGGATCTAAT AGCTTAATCC TGATCTTGCT GGAACCCATT CCGCAGTACT
2281CCATTCCTAG CAGTTATCAC AAGCTCAAAA GTCTCATGGC CAGGAGGACT TATTTGGAAT
2341GGCCCAAGGA AAAGAGCAAA CGTGGCCTTT TTTGGGCTAA CTTAAGGGCA GCCATTAATA
2401TTAAGCTGAC AGAGCAAGCA AAGAAATTGC CAACTTTCTT GTACAAAGTG GTTGATATCG
2461GTAAGCCTAT CCCTAACCCT CTCCTCGGTC TCGATTCTAC GTAGTAATGA ACTAGTCCGT
2521AACTTGAAAG TATTTCGATT TCTTGGCTTT ATATATCTTG TGGAAAGGAC GAGAATCCTT
2581ATGTGCAATC TACGTTACGC GTTAAGTCga caatcaacct ctggattaca aaatttgtga
2641aagatt

Download FASTA (ORF) (Full)