Construct: ORF TRCN0000468803

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF002742.1_s317c1
Derived from:
ccsbBroadEn_15493
DNA Barcode:
AGTAGGTACAACATGCGTTGTATC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
MAS1 (4142)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000468803
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 4142 MAS1 MAS1 proto-oncogene, G prot... NM_001366704.1 99.8% 100% 633C>T
2 human 4142 MAS1 MAS1 proto-oncogene, G prot... NM_002377.4 99.8% 100% 633C>T
3 mouse 17171 Mas1 MAS1 oncogene NM_008552.5 85.3% 90.1% (many diffs)
4 mouse 17171 Mas1 MAS1 oncogene XM_006523293.4 85.3% 90.1% (many diffs)
5 mouse 17171 Mas1 MAS1 oncogene XM_006523294.4 85.3% 90.1% (many diffs)
6 mouse 17171 Mas1 MAS1 oncogene XM_006523296.4 85.3% 90.1% (many diffs)
7 mouse 17171 Mas1 MAS1 oncogene XM_011246190.3 85.3% 90.1% (many diffs)
8 mouse 17171 Mas1 MAS1 oncogene XM_011246191.3 85.3% 90.1% (many diffs)
9 mouse 17171 Mas1 MAS1 oncogene XM_011246192.3 85.3% 90.1% (many diffs)
10 mouse 17171 Mas1 MAS1 oncogene XM_011246193.3 85.3% 90.1% (many diffs)
11 mouse 17171 Mas1 MAS1 oncogene XM_017317270.2 85.3% 90.1% (many diffs)
12 mouse 17171 Mas1 MAS1 oncogene XM_030249523.1 85.3% 90.1% (many diffs)
13 mouse 17171 Mas1 MAS1 oncogene XM_030249524.1 85.3% 90.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1044
ORF length:
975
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat ggatgggtca aacgtgacat catttgttgt tgaggaaccc acgaacatct
121caactggcag gaacgcctca gtcgggaatg cacatcggca aatccccatc gtgcactggg
181tcattatgag catctcccca gtggggtttg ttgagaatgg gattctcctc tggttcctgt
241gcttccggat gagaagaaat cccttcactg tctacatcac ccacctgtct atcgcagaca
301tctcactgct cttctgtatt ttcatcttgt ctatcgacta tgctttagat tatgagcttt
361cttctggcca ttactacaca attgtcacat tatcagtgac ttttctgttt ggctacaaca
421cgggcctcta tctgctgacg gccattagtg tggagaggtg cctgtcagtc ctttacccca
481tctggtaccg atgccatcgc cccaagtacc agtcggcatt ggtctgtgcc cttctgtggg
541ctctttcttg cttggtgacc accatggagt atgtcatgtg catcgacaga gaagaagaga
601gtcactctcg gaatgactgc cgagcagtca tcatctttat agccatccTG AGCTTCCTGG
661TCTTCACGCC CCTCATGCTG GTGTCCAGCA CCATCTTGGT TGTGAAGATC CGGAAGAACA
721CGTGGGCTTC CCATTCCTCC AAGCTTTACA TAGTCATCAT GGTCACCATC ATTATATTCC
781TCATCTTCGC TATGCCCATG AGACTCCTTT ACCTGCTGTA CTATGAGTAT TGGTCGACCT
841TTGGGAACCT ACACCACATT TCCCTGCTCT TCTCCACAAT CAACAGTAGC GCCAACCCTT
901TCATTTACTT CTTTGTGGGA AGCAGTAAGA AGAAGAGATT CAAGGAGTCC TTAAAAGTTG
961TTCTGACCAG GGCTTTCAAA GATGAAATGC AACCTCGGCG CCAGAAAGAC AATTGTAATA
1021CGGTCACAGT TGAGACTGTC GTCTTGCCAA CTTTCTTGTA CAAAGTGGTT GATATCGGTA
1081AGCCTATCCC TAACCCTCTC CTCGGTCTCG ATTCTACGTA GTAATGAACT AGTCCGTAAC
1141TTGAAAGTAT TTCGATTTCT TGGCTTTATA TATCTTGTGG AAAGGACGAA GTAGGTACAA
1201CATGCGTTGT ATCACGCGTT AAGTCgacaa tcaacctctg gattacaaaa tttgtgaaag
1261att

Download FASTA (ORF) (Full)