Construct: ORF TRCN0000469076

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF004061.1_s317c1
Derived from:
ccsbBroadEn_03539
DNA Barcode:
GCTCATCATTTATGCTCCGCAGTC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TMEM33 (55161)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000469076
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 55161 TMEM33 transmembrane protein 33 NM_018126.3 100% 100%
2 human 55161 TMEM33 transmembrane protein 33 XM_005248116.4 100% 100%
3 human 55161 TMEM33 transmembrane protein 33 XM_005248117.2 100% 100%
4 mouse 67878 Tmem33 transmembrane protein 33 NM_001285452.1 90.8% 97.5% (many diffs)
5 mouse 67878 Tmem33 transmembrane protein 33 NM_028975.4 90.8% 97.5% (many diffs)
6 mouse 67878 Tmem33 transmembrane protein 33 NM_030108.2 90.5% 97.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
807
ORF length:
741
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatggc agatacgacc ccgaacggcc cccaaggggc gggcgctgtg caattcatga
121tgaccaataa actggacacg gcaatgtggc tttctcgctt gttcacagtt tactgctctg
181ctctgtttgt tctgcctctt cttgggttgc atgaagcagc aagcttttac caacgtgctt
241tgctggcaaa tgctcttacc agtgctctga ggctgcatca aagattacca cacttccagt
301taagcagagc attcctggcc caggctttgt tagaggacag ctgccactac ctgttgtatt
361cactcatctt tgtaaattcc tatccagtta caatgagtat cttcccagtc ttgttattct
421cttTGCTTCA TGCTGCCACA TATACGAAAA AGGTCCTTGA CGCAAGGGGC TCAAATAGTT
481TACCTCTGCT GAGATCTGTC TTGGACAAAT TAAGTGCTAA TCAACAAAAT ATTCTGAAAT
541TCATTGCTTG CAATGAAATA TTCCTGATGC CTGCGACAGT TTTTATGCTT TTTAGTGGTC
601AAGGAAGTTT GCTCCAACCT TTTATATACT ATAGATTTCT TACCCTTCGA TATTCGTCTC
661GAAGAAACCC ATATTGTCGG ACCTTATTTA ATGAACTGAG GATTGTTGTT GAACACATAA
721TAATGAAACC TGCTTGCCCA CTGTTTGTGA GAAGACTTTG TCTCCAGAGC ATTGCCTTTA
781TAAGCAGATT GGCACCAACA GTTCCATACC CAACTTTCTT GTACAAAGTG GTTGATATCG
841GTAAGCCTAT CCCTAACCCT CTCCTCGGTC TCGATTCTAC GTAGTAATGA ACTAGTCCGT
901AACTTGAAAG TATTTCGATT TCTTGGCTTT ATATATCTTG TGGAAAGGAC GAGCTCATCA
961TTTATGCTCC GCAGTCACGC GTTAAGTCga caatcaacct ctggattaca aaatttgtga
1021aagatt

Download FASTA (ORF) (Full)