Construct: ORF TRCN0000469150

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF005622.1_s317c1
Derived from:
ccsbBroadEn_03637
DNA Barcode:
CTGTCAAGGCCTGTTGGTCGCTAA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
DOK4 (55715)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000469150
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 55715 DOK4 docking protein 4 NM_001369619.1 100% 100%
2 human 55715 DOK4 docking protein 4 NM_001369621.1 100% 100%
3 human 55715 DOK4 docking protein 4 NM_018110.5 100% 100%
4 human 55715 DOK4 docking protein 4 NM_001330556.2 89.3% 89.3% 862_978del
5 human 55715 DOK4 docking protein 4 NM_001369618.1 89.3% 89.3% 862_978del
6 human 55715 DOK4 docking protein 4 NM_001369620.1 89.3% 89.3% 862_978del
7 human 55715 DOK4 docking protein 4 XM_024450347.1 89.3% 89.3% 862_978del
8 human 55715 DOK4 docking protein 4 XM_024450348.1 89.3% 89.3% 862_978del
9 mouse 114255 Dok4 docking protein 4 NM_053246.3 91% 98.1% (many diffs)
10 mouse 114255 Dok4 docking protein 4 XM_006530579.3 91% 98.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1044
ORF length:
978
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatggc gaccaatttc agtgacatcg tcaagcaagg ctacgtgaag atgaagagca
121ggaagctcgg gatctaccgg aggtgctggc tggtgttccg gaaatcctcc agcaaggggc
181cccagcggct ggagaagtat ccagatgaga agtcggtgtg cctccggggc tgccccaagg
241tgactgagat cagcaacgtc aagtgtgtta cgcggctccc caaggagacc aagcggcagg
301cggtggccat catattcact gatgactcgg cacgtacctt cacctgcgac tcagagctag
361aggcagagga gtggtacaag acactatctg tggagtgtct ggggtcccgc ctcaacgaca
421tcagtctggg agaacctgac ctcctggccc caggggtgca gtgtgaacag acagatcgct
481tcaatgtctt cctgctgccc tgccccaacc tggacgtgta tggcgagtgc aagctgcaga
541tcacccacga gaacatctac ctctgggaca tccacaaccc ccgtgtgaag ctcgtctcgt
601ggcccctctg ctcactgcgc cgctatggcc gggatgccac acgctttacc ttcgaggctg
661gccggatgtg tgatgctggg gaaggactct ataccTTCCA GACACAAGAG GGGGAGCAGA
721TTTACCAGCG CGTCCACAGT GCCACCCTGG CCATCGCAGA GCAGCACAAG CGGGTCCTGC
781TGGAAATGGA GAAGAACGTG AGGCTGCTGA ACAAGGGCAC GGAACATTAC TCGTATCCCT
841GCACACCCAC GACCATGCTG CCGCGCAGTG CCTACTGGCA CCACATCACT GGTTCCCAGA
901ACATCGCCGA AGCCTCCAGC TATGCTGGTG AGGGGTATGG GGCAGCCCAG GCCAGCTCGG
961AAACAGACCT CCTCAACAGA TTCATCCTGC TAAAGCCAAA GCCCAGCCAG GGGGACAGCA
1021GTGAGGCCAA GACCCCATCC CAGTGCCCAA CTTTCTTGTA CAAAGTGGTT GATATCGGTA
1081AGCCTATCCC TAACCCTCTC CTCGGTCTCG ATTCTACGTA GTAATGAACT AGTCCGTAAC
1141TTGAAAGTAT TTCGATTTCT TGGCTTTATA TATCTTGTGG AAAGGACGAC TGTCAAGGCC
1201TGTTGGTCGC TAAACGCGTT AAGTCgacaa tcaacctctg gattacaaaa tttgtgaaag
1261att

Download FASTA (ORF) (Full)