Construct: ORF TRCN0000469503

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF013432.1_s317c1
Derived from:
ccsbBroadEn_04392
DNA Barcode:
TTCACCACTTTACTGCAACAGCAG
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
LZTS2 (84445)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000469503
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 84445 LZTS2 leucine zipper tumor suppre... NM_001318099.2 100% 100%
2 human 84445 LZTS2 leucine zipper tumor suppre... NM_001318100.2 100% 100%
3 human 84445 LZTS2 leucine zipper tumor suppre... NM_032429.4 100% 100%
4 human 84445 LZTS2 leucine zipper tumor suppre... XM_005270222.4 100% 100%
5 human 84445 LZTS2 leucine zipper tumor suppre... NM_001318101.1 67.1% 67.1% 406_407ins660
6 human 84445 LZTS2 leucine zipper tumor suppre... XM_017016781.1 67.1% 67.1% 406_407ins660
7 mouse 226154 Lzts2 leucine zipper, putative tu... NM_001130525.1 86.5% 91.6% (many diffs)
8 mouse 226154 Lzts2 leucine zipper, putative tu... NM_001130526.1 86.5% 91.6% (many diffs)
9 mouse 226154 Lzts2 leucine zipper, putative tu... NM_145503.2 86.5% 91.6% (many diffs)
10 mouse 226154 Lzts2 leucine zipper, putative tu... XM_006527004.3 86.5% 91.6% (many diffs)
11 mouse 226154 Lzts2 leucine zipper, putative tu... XM_006527005.3 58.9% 61% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2073
ORF length:
2007
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatggc cattgtgcag actctgccag tgccactgga gcctgctcct gaagctgcca
121ctgccccaca agctccagtc atgggtagtg tgagcagcct tatctcaggc cggccctgtc
181ccggggggcc agctcctccc cgccaccacg gccctcctgg gcccaccttc ttccgccagc
241aggatggcct gctacggggt ggctatgagg cacaggagcc gctgtgccca gctgtgcccc
301ctaggaaggc tgtccctgtc accagcttca cctacatcaa tgaggacttc cggacagagt
361caccccccag cccaagcagt gatgttgagg atgcccgaga gcagcgggca cacaatgccc
421acctccgcgg cccaccacca aagctcatcc ctgtctctgg aaagctggag aagaacatgg
481agaagatcct gatccgccca acagccttca agccagtgct gcccaaacct cgaggggctc
541cgtccctgcc tagcttcatg ggtcctcggg ccaccgggct gtctgggagc cagggcagcc
601tgacgcagct gtttgggggc cctgcctcct cctcctcctc ttcctcctcc tcttcagctg
661ctgacaaacc cctggcattt agtggctggg ccagtggctg cccatcaggg acgctatccg
721actctggccg aaactcactg tccagcctgc ccacctacag caccggaggt gccgagccaa
781ccaccagctc cccaggcggg cacctgcctt cccatggctc tgggcgaggg gcactgcctg
841ggccagcccg aggggtccct actgggccct cccactcaga cagtggccgg tcctcctcca
901gcaagagcac aggctcccta gggggccgtg tggctggggg gcttttgggc agtggtactc
961gggcctcccc tgacagcagc tcctgtgggg agcgctcacc accacccccg cctccacctc
1021cttcggatga ggccctgctg cactgtgtcc tggaaggaaa gctccgagac cgggaggcag
1081agcttcagca gctgcgggac agtctggacg agaatgaggc taccatgtgc caggcatacg
1141aggagcggca gcggcactgg cagcgagagc gtgaggccct gcgagaggac tgtgcggccc
1201aggcacagcg ggcacagcgg gcccaacagc tgctgcagct gcaggtgttc cagctgcagc
1261aggagaagcg gcaattgcag gacgacttcg cacagctgct gcaggagcgc gaacagctgg
1321agcggcgctg cgccaccttg gagcgggagc agcgggagct cgggccgagg cttgaggaga
1381ccaagtggga ggtgtgccag aaatcaggcg agatctccct gctgaagcag cagctgaaag
1441agtctcaggc agagctggtg cagaagggca gcgagctggt ggctctgcgg gtggcgctgc
1501gggaggcccg tgctacgctg cgggtcagtg agggccgtgc gcggggtcta caggaggccg
1561cccgagctcg ggagctggag ctggaagcct gttcccagga gctgcagcga caccgccagg
1621aagctgagca gctgcgggag aaagctgggc agttggatgc tgaggcggcc ggacTCCGGG
1681AGCCCCCTGT GCCACCTGCC ACCGCTGACC CATTCCTCCT GGCAGAGAGT GATGAGGCCA
1741AAGTGCAGCG GGCAGCAGCC GGGGTTGGGG GCAGCTTGCG GGCCCAGGTG GAGCGATTGC
1801GGGTGGAGCT GCAGCGGGAG CGGCGGCGGG GTGAGGAGCA GCGGGACAGC TTTGAGGGGG
1861AGCGGCTGGC CTGGCAGGCA GAGAAGGAGC AGGTGATCCG CTACCAGAAG CAGCTGCAGC
1921ACAACTACAT CCAGATGTAC CGGCGCAACC GGCAGCTAGA GCAGGAGCTG CAGCAGCTCA
1981GCCTGGAGCT GGAGGCCCGG GAGCTCGCTG ACCTGGGCCT GGCCGAGCAG GCCCCCTGCA
2041TCTGCCTGGA GGAGATCACT GCTACTGAGA TCTACCCAAC TTTCTTGTAC AAAGTGGTTG
2101ATATCGGTAA GCCTATCCCT AACCCTCTCC TCGGTCTCGA TTCTACGTAG TAATGAACTA
2161GTCCGTAACT TGAAAGTATT TCGATTTCTT GGCTTTATAT ATCTTGTGGA AAGGACGATT
2221CACCACTTTA CTGCAACAGC AGACGCGTTA AGTCgacaat caacctctgg attacaaaat
2281ttgtgaaaga tt

Download FASTA (ORF) (Full)