Construct: ORF TRCN0000469558

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF011003.1_s317c1
Derived from:
ccsbBroadEn_11718
DNA Barcode:
CATGGACCTATTCTGCATCAAGCG
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
KIAA0930 (23313)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000469558
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 23313 KIAA0930 KIAA0930 XM_011530017.2 100% 100%
2 human 23313 KIAA0930 KIAA0930 XM_017028672.1 95.8% 95.8% 1_48del
3 human 23313 KIAA0930 KIAA0930 NM_001009880.1 91.5% 91.5% 1_102del
4 human 23313 KIAA0930 KIAA0930 NM_015264.1 90.4% 90.4% 1_117del
5 mouse 223739 5031439G07Rik RIKEN cDNA 5031439G07 gene NM_001033273.2 73.7% 79.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1176
ORF length:
1110
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgtt ctccacctac ttcatggaga aatgggctcc ccggcaggac gacatgcttt
121tctatgtgcg ccggaagctg gcgtactccg gcagcgaaag cggtgcagac gggaggaagg
181cagctgagcc tgaggtggag gtggaggtgt accggcggga ctccaagaag ctgccaggcc
241tgggagaccc tgacatcgac tgggaggaga gcgtctgcct gaatctcatc ctgcagaagc
301tggactacat ggtgacctgt gcggtgtgca cacgtgctga cggcggggac attcacatcc
361ataagaagaa atctcagcaa gtgttcgcgt cccccagtaa acaccccatg gacagcaagg
421gggaggagtc caagatcagc taccccaaca tcttcttcat gattgacagc ttcgaggagg
481tgttcagcga catgaccgta ggggaaggag agatggtctg tgtggagctg gtggctagtg
541acaaaaccaa cacgttccag ggggtcatct ttcagggctc catccgctac gaggcgctca
601agaaggtgta tgacaaccgg gtgagcgtgg ccgcccgcat ggcacagaag atgtcgtttg
661gcttctacaa gtacagcaac atggagtttg tgcgcatgaa gggcccccag ggcaagggcc
721acgccgagat ggcggTCAGC CGAGTGTCTA CAGGTGACAC ATCCCCCTGT GGGACTGAAG
781AGGACTCCAG CCCAGCTTCG CCCATGCACG AGCGGGTGAC CTCCTTCAGC ACACCCCCCA
841CCCCAGAACG GAACAACCGG CCTGCCTTCT TCTCCCCATC CCTCAAGAGG AAGGTGCCCC
901GGAACCGGAT CGCTGAGATG AAGAAGTCGC ACTCGGCCAA CGACAGCGAG GAGTTCTTCC
961GGGAGGACGA CGGTGGAGCC GATCTGCACA ATGCAACCAA CCTGCGGTCT CGGTCCCTGT
1021CGGGCACAGG ACGGTCCCTG GTCGGGTCCT GGCTGAAGCT GAACAGAGCA GATGGAAACT
1081TCCTTCTCTA TGCACACTTA ACCTACGTCA CGTTGCCGCT GCATCGGATT TTAACAGACA
1141TCCTGGAAGT TCGGCAGAAG CCCATCCTGA TGACCTACCC AACTTTCTTG TACAAAGTGG
1201TTGATATCGG TAAGCCTATC CCTAACCCTC TCCTCGGTCT CGATTCTACG TAGTAATGAA
1261CTAGTCCGTA ACTTGAAAGT ATTTCGATTT CTTGGCTTTA TATATCTTGT GGAAAGGACG
1321ACATGGACCT ATTCTGCATC AAGCGACGCG TTAAGTCgac aatcaacctc tggattacaa
1381aatttgtgaa agatt

Download FASTA (ORF) (Full)