Construct: ORF TRCN0000469721

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF012823.1_s317c1
Derived from:
ccsbBroadEn_12908
DNA Barcode:
CGGAATGTGGGCCCTCCCGAAACT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
PPIL4 (85313)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000469721
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 85313 PPIL4 peptidylprolyl isomerase li... NM_139126.4 39% 39% 1_900del
2 mouse 67418 Ppil4 peptidylprolyl isomerase (c... NM_026141.3 34.8% 36.1% (many diffs)
3 mouse 67418 Ppil4 peptidylprolyl isomerase (c... XR_001779581.1 15.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
642
ORF length:
576
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgga caatgtgctt atagatgaca gaagaataca tgtggatttt agccagtcgg
121ttgcaaaggt taaatggaaa ggaaaaggtg ggaaatacac caagagtgat ttcaaggagt
181atgaaaaaga acaggataaa ccacctaatt tggttctgaa agataaagta aagcccaaac
241aggatacaaa atacgatctt atattagatg agcaggccga agactcaaaa tcaagtcact
301cacacacaag taaaaaacac aagaagaaaa cccatcactg ttctgaagag aaagaagatg
361aggactacat gccaatcaaa aatactaatc aggatatcta tagagaaatg gggtttggtc
421actatgaaga agaagaaagc tgttgggaga aacaaaagag tgaaaagaga gaccgaactc
481agaaccgaag tcgtagccga tctcgagaga gggatggcca ttatagtaat agtcataaat
541caaaatacca aacagatctt tatgaaagag aaaggagtaA AAAGAGAGAC CGAAGCAGAA
601GTCCAAAGAA GTCCAAAGAT AAAGAAAAAT CTAAGTATAG ATGCCCAACT TTCTTGTACA
661AAGTGGTTGA TATCGGTAAG CCTATCCCTA ACCCTCTCCT CGGTCTCGAT TCTACGTAGT
721AATGAACTAG TCCGTAACTT GAAAGTATTT CGATTTCTTG GCTTTATATA TCTTGTGGAA
781AGGACGACGG AATGTGGGCC CTCCCGAAAC TACGCGTTAA GTCgacaatc aacctctgga
841ttacaaaatt tgtgaaagat t

Download FASTA (ORF) (Full)