Construct: ORF TRCN0000469761

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF000813.1_s317c1
Derived from:
ccsbBroadEn_01004
DNA Barcode:
GCTGCGCTCAATACTTTACAAGTG
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
MELTF (4241)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000469761
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 4241 MELTF melanotransferrin NM_033316.4 100% 100%
2 human 4241 MELTF melanotransferrin XM_011512851.2 42.1% 36.8% (many diffs)
3 human 4241 MELTF melanotransferrin NM_005929.6 38.2% 33.5% (many diffs)
4 human 4241 MELTF melanotransferrin XM_006713643.3 36.9% 32.4% (many diffs)
5 human 4241 MELTF melanotransferrin XM_011512850.2 36.9% 32.3% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
972
ORF length:
906
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgcg gggtccgagc ggggctctgt ggctgctcct ggctctgcgc accgtgctcg
121gtggcatgga ggtgcggtgg tgcgccacct cggacccaga gcagcacaag tgcggcaaca
181tgagcgaggc cttccgggaa gcgggcatcc agccctccct cctctgcgtc cggggcacct
241ccgccgacca ctgcgtccag ctcatcgcgg cccaggaggc tgacgccatc actctggatg
301gaggagccat ctatgaggcg ggaaaggagc acggcctgaa gccggtggtg ggcgaagtgt
361acgatcaaga ggtcggtacc tcctattacg ccgtggctgt ggtcaggagg agctcccatg
421tgaccattga caccctgaaa ggcgtgaagt cctgccacac gggcatcaat cgcacagtgg
481gctggaacgt gcccgtgggc tacctggtgg agagcggccg cctctcggtg atgggctgcg
541atgtactcaa agctgtcagc gactattttg ggggcagctg cgtcccgggg gcaggagaga
601ccagttactc tgagtcccTC TGTCGCCTCT GCAGGGGTGA CAGCTCTGGG GAAGGGGTGT
661GTGACAAGAG CCCCCTGGAG AGATACTACG ACTACAGCGG GGCCTTCCGG TGCCTGGCGG
721AAGGGGCAGG GGACGTGGCT TTTGTGAAGC ACAGCACGGT ACTGGAGAAC ACGGATGAAA
781GTCCATCACG AAGGCAAACA TGGACCAGAT CTGAGGAGGA AGAAGGCGAG TGCCCTGCAC
841ACGAGGAAGC ACGTAGGACG ATGCGCTCTA GTGCTGGGCA AGCCTGGAAA TGGGCTCCCG
901TTCACAGGCC CCAGGACGAG TCTGACAAAG GAGAATTTGG AAAACGGGCA AAGAGTAGGG
961ATATGTTGGG TTACCCAACT TTCTTGTACA AAGTGGTTGA TATCGGTAAG CCTATCCCTA
1021ACCCTCTCCT CGGTCTCGAT TCTACGTAGT AATGAACTAG TCCGTAACTT GAAAGTATTT
1081CGATTTCTTG GCTTTATATA TCTTGTGGAA AGGACGAGCT GCGCTCAATA CTTTACAAGT
1141GACGCGTTAA GTCgacaatc aacctctgga ttacaaaatt tgtgaaagat t

Download FASTA (ORF) (Full)