Construct: ORF TRCN0000469847

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF002732.1_s317c1
Derived from:
ccsbBroadEn_03474
DNA Barcode:
GAGTAGGCTCCAAAGGCCGCCGCT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
PLPPR1 (54886)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000469847
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 54886 PLPPR1 phospholipid phosphatase re... NM_017753.3 100% 100%
2 human 54886 PLPPR1 phospholipid phosphatase re... NM_207299.2 100% 100%
3 mouse 272031 Plppr1 phospholipid phosphatase re... NM_178756.4 90.6% 96.3% (many diffs)
4 mouse 272031 Plppr1 phospholipid phosphatase re... XM_006537968.3 90.6% 96.3% (many diffs)
5 mouse 272031 Plppr1 phospholipid phosphatase re... XM_011250049.2 90.6% 96.3% (many diffs)
6 mouse 272031 Plppr1 phospholipid phosphatase re... XM_017320250.1 90.6% 96.3% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1041
ORF length:
975
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatggc tgtaggaaac aacactcaac gaagttattc catcatcccg tgttttatat
121ttgttgagct tgtcatcatg gctgggacag tgctgcttgc ctactacttc gaatgcactg
181acacttttca ggtgcatatc caaggattct tctgtcagga cggagactta atgaagcctt
241acccagggac agaggaagaa agcttcatca cccctctggt gctctattgt gtgctggctg
301ccaccccaac tgctattatt tttattggtg agatatccat gtatttcata aaatcaacaa
361gagaatccct gattgctcag gagaaaacaa ttctgaccgg agaatgctgt tacctgaacc
421ccttacttcg aaggatcata agattcacag gggtgtttgc atttggactt tttgctactg
481acatttttgt aaacgccgga caagtggtca ctgggcactt aacgccatac ttcctgactg
541tgtgcaagcc aaactacacc agtgcagact gccaagcgca ccaccagttt ataaacaatg
601ggaacatttg tactggggac ctggaagtga tagaaaaggc tcggagatcc tttccctcca
661aacacgctgc tctgagcatt tactccgccT TATATGCCAC GATGTATATT ACAAGCACAA
721TCAAGACGAA GAGCAGTCGA CTGGCCAAGC CGGTGCTGTG CCTCGGAACT CTCTGCACAG
781CCTTCCTGAC AGGCCTCAAC CGGGTCTCTG AGTATCGGAA CCACTGCTCG GACGTGATTG
841CTGGTTTCAT CCTGGGCACT GCAGTGGCCC TGTTTCTGGG AATGTGTGTG GTTCATAACT
901TTAAAGGAAC GCAAGGATCT CCTTCCAAAC CCAAGCCTGA GGATCCCCGT GGAGTACCCC
961TAATGGCTTT CCCAAGGATA GAAAGCCCTC TGGAAACCTT AAGTGCACAG AATCACTCTG
1021CGTCCATGAC CGAAGTTACC TGCCCAACTT TCTTGTACAA AGTGGTTGAT ATCGGTAAGC
1081CTATCCCTAA CCCTCTCCTC GGTCTCGATT CTACGTAGTA ATGAACTAGT CCGTAACTTG
1141AAAGTATTTC GATTTCTTGG CTTTATATAT CTTGTGGAAA GGACGAGAGT AGGCTCCAAA
1201GGCCGCCGCT ACGCGTTAAG TCgacaatca acctctggat tacaaaattt gtgaaagatt

Download FASTA (ORF) (Full)