Construct: ORF TRCN0000469867

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF001467.1_s317c1
Derived from:
ccsbBroadEn_01593
DNA Barcode:
GCGAAGCAAAGATTAAGTCCGACC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
SRP14 (6727)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000469867
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 6727 SRP14 signal recognition particle 14 NM_003134.6 100% 100%
2 human 6727 SRP14 signal recognition particle 14 NM_001309434.1 50% 44.9% 0_1ins184;26_65del
3 mouse 20813 Srp14 signal recognition particle 14 NM_009273.4 70.5% 72% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
474
ORF length:
408
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatggt gttgttggag agcgagcagt tcctgacgga gctgaccaga cttttccaga
121agtgccggac gtcgggcagc gtctatatca ccttgaagaa gtatgacggt cgaaccaaac
181ccattccaaa gaagggtact gtggagggct ttgagcccgc agacaacaag tgtctgttaa
241gagctaccga tgggaagaag aagatcagca ctgtggtgag ctccaaggaa gtgaataagt
301ttcagatggc ttattcaaac ctccttagag cTAACATGGA TGGGCTGAAG AAGAGAGACA
361AAAAGAACAA AACTAAGAAG ACCAAAGCAG CAGCAGCAGC AGCAGCAGCA GCACCTGCCG
421CAGCAGCAAC AGCACCAACA ACAGCAGCAA CAACAGCAGC AACAGCAGCA CAGTACCCAA
481CTTTCTTGTA CAAAGTGGTT GATATCGGTA AGCCTATCCC TAACCCTCTC CTCGGTCTCG
541ATTCTACGTA GTAATGAACT AGTCCGTAAC TTGAAAGTAT TTCGATTTCT TGGCTTTATA
601TATCTTGTGG AAAGGACGAG CGAAGCAAAG ATTAAGTCCG ACCACGCGTT AAGTCgacaa
661tcaacctctg gattacaaaa tttgtgaaag att

Download FASTA (ORF) (Full)