Construct: ORF TRCN0000470037

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF005449.1_s317c1
Derived from:
ccsbBroadEn_11424
DNA Barcode:
TCTCCCATAGCAGTGCAGTTAGAC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF518A (9849)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000470037
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 9849 ZNF518A zinc finger protein 518A NM_001278526.2 100% 100%
2 human 9849 ZNF518A zinc finger protein 518A NM_001278524.2 64.2% 64.2% 1_1590del
3 human 9849 ZNF518A zinc finger protein 518A NM_001278525.1 64.2% 64.2% 1_1590del
4 human 9849 ZNF518A zinc finger protein 518A NM_001330732.2 64.2% 64.2% 1_1590del
5 human 9849 ZNF518A zinc finger protein 518A NM_001330733.1 64.2% 64.2% 1_1590del
6 human 9849 ZNF518A zinc finger protein 518A NM_001330734.1 64.2% 64.2% 1_1590del
7 human 9849 ZNF518A zinc finger protein 518A NM_001330735.1 64.2% 64.2% 1_1590del
8 human 9849 ZNF518A zinc finger protein 518A NM_001330736.1 64.2% 64.2% 1_1590del
9 human 9849 ZNF518A zinc finger protein 518A NM_001330737.1 64.2% 64.2% 1_1590del
10 human 9849 ZNF518A zinc finger protein 518A NM_001330738.1 64.2% 64.2% 1_1590del
11 human 9849 ZNF518A zinc finger protein 518A NM_014803.4 64.2% 64.2% 1_1590del
12 human 9849 ZNF518A zinc finger protein 518A XM_011540406.2 64.2% 64.2% 1_1590del
13 human 9849 ZNF518A zinc finger protein 518A XM_011540410.2 64.2% 64.2% 1_1590del
14 human 9849 ZNF518A zinc finger protein 518A XM_011540412.2 64.2% 64.2% 1_1590del
15 human 9849 ZNF518A zinc finger protein 518A XM_011540413.3 64.2% 64.2% 1_1590del
16 human 9849 ZNF518A zinc finger protein 518A XM_011540415.2 64.2% 64.2% 1_1590del
17 human 9849 ZNF518A zinc finger protein 518A XM_011540418.2 64.2% 64.2% 1_1590del
18 human 9849 ZNF518A zinc finger protein 518A XM_011540419.2 64.2% 64.2% 1_1590del
19 human 9849 ZNF518A zinc finger protein 518A XM_011540420.2 64.2% 64.2% 1_1590del
20 human 9849 ZNF518A zinc finger protein 518A XM_017016986.1 64.2% 64.2% 1_1590del
21 human 9849 ZNF518A zinc finger protein 518A XM_017016989.1 64.2% 64.2% 1_1590del
22 human 9849 ZNF518A zinc finger protein 518A XM_017016992.1 64.2% 64.2% 1_1590del
23 human 9849 ZNF518A zinc finger protein 518A XM_017016994.2 64.2% 64.2% 1_1590del
24 human 9849 ZNF518A zinc finger protein 518A XM_017016998.1 64.2% 64.2% 1_1590del
25 human 9849 ZNF518A zinc finger protein 518A XM_017016999.1 64.2% 64.2% 1_1590del
26 human 9849 ZNF518A zinc finger protein 518A XM_024448265.1 64.2% 64.2% 1_1590del
27 human 9849 ZNF518A zinc finger protein 518A XM_024448266.1 64.2% 64.2% 1_1590del
28 human 9849 ZNF518A zinc finger protein 518A XM_024448267.1 64.2% 64.2% 1_1590del
29 human 9849 ZNF518A zinc finger protein 518A XM_024448268.1 64.2% 64.2% 1_1590del
30 human 9849 ZNF518A zinc finger protein 518A XM_024448269.1 64.2% 64.2% 1_1590del
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
2928
ORF length:
2859
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat gactttgata tctcaaagga ataatatgct tcaaacaatg gattatgaga
121aaagtgtatc ttctttgtca gcaacatcag aattggttac agcatcagtg aatttgacca
181caaaatttga aacaagagat aatgttgact tctggggaaa tcatctcact cagagtcacc
241ccgaggtatt aggtaccacc attaaaagtc cagataaagt caactgtgtt gccaaaccaa
301atgcatacaa cagtggagat atgcataatt attgcattaa ttatggcaac tgtgagttac
361ctgttgaatc ctccaaccaa ggatcattac cttttcataa ttactcaaaa gtgaataatt
421ctaataaacg tcgtaggttt tcaggaacag cagtgtatga aaaccctcaa agagaatctt
481catccagcaa aacagttgtc caacaaccaa ttagtgaatc atttttatca ctagtgaggc
541aggagagctc aaaaccagat agcctattag catctattag ccttttaaat gataaagatg
601gaactttaaa agcaaaatct gaaattgaag aacagtatgt tttagaaaaa ggacaaaaca
661ttgatggaca aaacctgtac agtaatgaaa atcaaaattt agagtgtgcg actgaaaaat
721ctaaatggga agacttttct aatgtcgatt cacctatgat gcctagaatc acatctgttt
781tctctctcca gagccaacag gcatcagaat ttctgccacc tgaagtaaac caattgcttc
841aggatgtatt gaaaataaaa cctgatgtaa aacaagactc tagtaacact ccaaataaag
901gcttgccact tcattgtgac cagtcatttc aaaaacacga gagagaaggc aaaattgttg
961aatcttcgaa agatttcaaa gtgcaaggca tcttcccagt tccacctggc agtgtgggta
1021ttaatgtgcc tacaaatgat ttgaatttga aatttggaaa agaaaaacaa gtgtcatcaa
1081taccacaaga tgtgagagat tcagagaaga tgcctagaat ttcaggtttt ggcacattac
1141ttaagactca gtcagatgcg ataataacac agcagcttgt aaaagacaaa ctacgagcca
1201ccacacaaaa tttaggttct ttttatatgc agagtccact tttaaattca gaacaaaaaa
1261aaactataat tgttcagact tcaaaaggat tcttaatacc attgaacatt actaacaagc
1321ctgggctacc agttattcct ggaaatgcac ttccattggt taattcacaa ggtatccctg
1381cttctctttt tgtaaacaag aaacctggga tggttttaac acttaataat gggaaacttg
1441aaggtgtttc cgctgtcaaa accgagggtg ccccagctcg tggaactgtg actaaggagc
1501cttgcaaaac acctattttg aaggtagaac caaacaataa ttgtcttaca cctggacttt
1561gttccagcat tggcagttgt ttgagcatga aaagtagctc agaaaatact ttgccattaa
1621aaggccctta cattttgaaa ccaacgagtt ctgtgaaagc tgttcttatt cctaacatgc
1681tatctgagca acagagcact aagttgaata tctccgattc agtaaaacag cagaatgaga
1741tttttccaaa accacctctt tataccttct tgcctgatgg caaacaagct gtttttttaa
1801agtgtgtgat gccaaataaa actgagctgc ttaagcccaa attagtccaa aatagtactt
1861atcaaaatat acagccaaag aaacctgaag gaacaccaca aagaatattg ctgaaaattt
1921ttaaccctgt tttaaatgtg actgctgcta ataatctgtc agtaagcaac tctgcatcct
1981cattgcaaaa agacaacgta ccatctaatc agattatagg aggagagcag aaagagccag
2041aatctagaga tgccttaccc ttcttactag atgacttaat gccagcaaat gaaattgtga
2101taacttctac tgcaacatgc ccagaatctt ctgaggaacc aatatgtgtc agtgactgtt
2161cagagtccag ggtattaagg tgtaaaacaa attgtagaat tgagaggaac ttcaatagaa
2221aaaagacttc caaaaaaatt ttttcaaaaa caaaaactca tggaagtaaa gactctgaaa
2281ctgcctttgt atctagaaac agaaactgta aacgaaagtg tagggatagt taccaagaac
2341ctccaagaag aaaagcaaca ttgcatagaa agtgtaaaga aaaggcaaaa cctgaagatg
2401tccgtgaaac atttggattt agcagaccTA GGCTTTCAAA AGATTCCATC AGAACTTTGC
2461GGCTTTTCCC TTTTAGTTCT AAACAGCTTG TGAAATGTCC TAGGAGAAAC CAACCAGTTG
2521TAGTTTTGAA TCATCCTGAC GCAGATGCAC CAGAAGTAGT AAGTGTAATG AAAACTATTG
2581CTAAATTTAA TGGACATGTA CTTAAGGTTT CATTGTCAAA AAGAACTATA AATGCTTTAC
2641TGAAACCAGT TTGTTATAAC CCTCCTAAAA CAACTTATGA TGATTTTTCC AAGAGGCACA
2701AAACATTTAA ACCTGTTAGT TCTGTGAAAG AAAGATTTGT GCTAAAATTA ACACTCAAAA
2761AGACAAGCAA AAACAATTAC CAGATTGTGA AGACTACCTC TGAAAATATT TTGAAGGCTA
2821AATTTAACTG TTGGTTTTGT GGTAGAGTAT TTGACAATCA GGATACTTGG GCTGGTCATG
2881GGCAGAGACA TTTAATGGAA GCTACTCGGG ATTGGAACAT GTTAGAATTG CCAACTTTCT
2941TGTACAAAGT GGTTGATATC GGTAAGCCTA TCCCTAACCC TCTCCTCGGT CTCGATTCTA
3001CGTAGTAATG AACTAGTCCG TAACTTGAAA GTATTTCGAT TTCTTGGCTT TATATATCTT
3061GTGGAAAGGA CGATCTCCCA TAGCAGTGCA GTTAGACACG CGTTAAGTCg acaatcaacc
3121tctggattac aaaatttgtg aaagatt

Download FASTA (ORF) (Full)

GPP Web Portal Terms of Service

Effective Date: December 8, 2025
By using this site, you agree to our terms and conditions below.

Overview of Terms

The data made available on this website were generated for research purposes and are not intended for clinical or commercial uses. Commercial use (or other use for profit-making purposes) of the GPP Web Portal and its tools, is not permitted under these terms and may require a separate license agreement from Broad or its contributors. For more information, please contact partnering@broadinstitute.org.

The original data may be subject to rights claimed by third parties, including but not limited to, patent, copyright, other intellectual property rights, biodiversity-related access and benefit-sharing rights. It is the responsibility of users of Broad Institute services to ensure that their use of the data does not infringe any of the rights of such third parties.

Any questions or comments concerning these Terms of Use can be addressed to: legal@broadinstitute.org.

By accessing and viewing this GPP Web Portal, you agree to the following terms and conditions:

Attribution

You agree to acknowledge the Broad Institute (e.g., in publications, services or products) for any of your use of its online services, databases or software in accordance with good scientific practice. You agree to use the acknowledgment wording provided for the relevant tools as indicated on the FAQ for each tool.

Updating the Terms of Use

We reserve the right to update these Terms of Use at any time. When alterations are inevitable, we will attempt to give reasonable notice of any changes by placing a notice on our website, but you may wish to check each time you use the website. The date of the most recent revision will appear on this, the "GPP Web Portal Terms of Use" page. If you do not agree to these changes, please do not continue to use our online services. We will also make available an archived copy of the previous Terms of Use for comparison.

Indemnification and Disclaimer of Warranties

You are using this GPP Web Portal at your own risk, and you hereby agree to hold Broad and its contributors and their trustees, directors, officers, employees, and affiliated investigators harmless for any third party claims which may arise from your use of the GPP Web Portal, the tools available therein, or any portion thereof. Further, you agree to indemnify Broad, its contributors, and its and their trustees, directors, officers, employees, affiliated investigators, students, and affiliates for any loss, costs, claims, damages, or other liabilities arising from any unpermitted commercial or profit-making use you make of the GPP Web Portal. The GPP Web Portal is a research tool and is provided "as is". Broad does not represent that the GPP Web Portal is free of errors or bugs or suitable for any particular tasks.

ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS ARE DISCLAIMED. IN NO EVENT SHALL BROAD OR ITS CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THE GPP WEB PORTAL, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Governing Law

The terms and conditions herein shall be construed, governed, interpreted, and applied in accordance with the internal laws of the Commonwealth of Massachusetts, U.S.A. Furthermore, by accessing, downloading, or using the Database, You consent to the personal jurisdiction of, and venue in, the state and federal courts within Massachusetts with respect to Your download or use of the Database.