Construct: ORF TRCN0000470352

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF015701.1_s317c1
Derived from:
ccsbBroadEn_07076
DNA Barcode:
TCTGACGCTTAAGACCTGATTCCT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TSPAN7 (7102)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000470352
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 7102 TSPAN7 tetraspanin 7 NM_004615.3 99.5% 98.7% 115T>C;157G>A;379G>A
2 mouse 21912 Tspan7 tetraspanin 7 NM_019634.2 93% 97.1% (many diffs)
3 mouse 21912 Tspan7 tetraspanin 7 XM_006527583.1 82.7% 85.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
813
ORF length:
747
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatggc atcgaggaga atggagacca aacctgtgat aacctgtctc aaaaccctcc
121tcatcatcta ctccttcgtc ttctggatca ctggggtgat cctgctggct gttggagtcc
181ggggcaaact tactctgggc acctatatct cccttattgc caagaactcc acaaatgctc
241cctatgtgct catcggaact ggcaccacta ttgttgtctt tggcctgttt ggatgctttg
301ctacatgtcg tggtagccca tggatgctga aactgtatgc catgtttctg tccctggtgt
361tcctggctga gctcgtagct ggCATTTCAG GGTTTGTGTT TCGTCATGAG ATCAAGGACA
421CCTTCCTGAG GACTTACACG GACACTATGC AGACTTACAA TGGCAATGAT GAGAGGAGCC
481GGGCAGTGGA CCATGTGCAG CGCAGCCTGA GCTGCTGTGG TGTGCAGAAC TACACCAACT
541GGAGCACCAG CCCCTACTTC CTGGAGCATG GCATCCCCCC CAGCTGCTGC ATGAACGAAA
601CTGATTGTAA TCCCCAGGAT CTACACAATC TGACTGTGGC CGCCACCAAA GTTAACCAGA
661AGGGTTGTTA TGATCTGGTA ACTAGTTTCA TGGAGACTAA CATGGGAATC ATCGCTGGAG
721TGGCGTTTGG AATCGCATTC TCCCAGTTAA TTGGCATGCT GCTGGCCTGC TGTCTGTCCC
781GGTTCATCAC GGCCAATCAG TATGAGATGG TGTACCCAAC TTTCTTGTAC AAAGTGGTTG
841ATATCGGTAA GCCTATCCCT AACCCTCTCC TCGGTCTCGA TTCTACGTAG TAATGAACTA
901GTCCGTAACT TGAAAGTATT TCGATTTCTT GGCTTTATAT ATCTTGTGGA AAGGACGATC
961TGACGCTTAA GACCTGATTC CTACGCGTTA AGTCgacaat caacctctgg attacaaaat
1021ttgtgaaaga tt

Download FASTA (ORF) (Full)