Construct: ORF TRCN0000470493

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF005631.1_s317c1
Derived from:
ccsbBroadEn_00032
DNA Barcode:
GCACGTTTTCGAGCTATGTGGATG
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ADSL (158)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000470493
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 158 ADSL adenylosuccinate lyase NM_000026.4 100% 100%
2 human 158 ADSL adenylosuccinate lyase NM_001363840.2 98.9% 98.7% 1433_1434insGAAAGCAGAA;1436_1438delCCTinsATG;1440_1441insTG
3 human 158 ADSL adenylosuccinate lyase XM_017028637.1 96.9% 96.9% 357_358ins45
4 human 158 ADSL adenylosuccinate lyase XM_011529977.3 91.6% 91% (many diffs)
5 human 158 ADSL adenylosuccinate lyase XM_017028636.1 88.7% 88.2% (many diffs)
6 human 158 ADSL adenylosuccinate lyase NM_001123378.2 87.8% 87.8% 1188_1189ins177
7 human 158 ADSL adenylosuccinate lyase NM_001317923.1 86.7% 86.7% 0_1ins192
8 human 158 ADSL adenylosuccinate lyase XR_002958670.1 85.2% (many diffs)
9 human 158 ADSL adenylosuccinate lyase XM_024452166.1 84.7% 84.7% 357_358ins45;1143_1144ins177
10 human 158 ADSL adenylosuccinate lyase NR_134256.1 81.2% 1_59del;1070_1100del;1543_1788del
11 human 158 ADSL adenylosuccinate lyase XM_011529980.3 80.4% 79.8% (many diffs)
12 human 158 ADSL adenylosuccinate lyase XR_001755176.2 79.7% 1_57del;848_1032del;1695_1821del
13 human 158 ADSL adenylosuccinate lyase XR_937825.3 76.5% (many diffs)
14 human 158 ADSL adenylosuccinate lyase XM_017028639.2 67.9% 67.1% 0_1ins340;17_18ins125
15 human 158 ADSL adenylosuccinate lyase XR_002958671.1 63.5% (many diffs)
16 human 158 ADSL adenylosuccinate lyase XM_017028638.1 62.1% 60.8% (many diffs)
17 human 158 ADSL adenylosuccinate lyase XM_017028640.1 39% 38.4% (many diffs)
18 mouse 11564 Adsl adenylosuccinate lyase NM_009634.6 86.7% 94% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1518
ORF length:
1452
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatggc ggctggaggc gatcatggtt cgcccgacag ctaccgctca cctcttgcct
121cccgctatgc cagcccggag atgtgcttcg tgtttagcga caggtataaa ttccggacat
181ggcggcagct gtggctgtgg ctggcggagg ccgagcagac attgggtttg cctatcacag
241atgaacaaat ccaggagatg aaatcaaacc tggagaacat cgacttcaag atggcagctg
301aggaagagaa acgtttacga catgatgtga tggctcacgt gcacacattt ggccactgct
361gtccaaaagc tgcaggcatt attcaccttg gtgctacttc ttgctatgtt ggagacaata
421ctgacttgat tattcttaga aatgcacttg acctgctttt gccaaagctt gccagagtga
481tctctcggct tgccgacttt gctaaggaac gagccagtct acccacatta ggtttcacac
541atttccagcc tgcacagctg accacagttg ggaaacgttg ctgtctttgg attcaggatc
601tttgcatgga tctccagaac ttgaagcgtg tccgagatga cctgcgcttc cggggagtaa
661agggtaccac tggcactcag gccagtttcc tgcagctctt tgagggagat gaccataagg
721tagagcagct tgacaagatg gtgacagaaa aggcaggatt taagagagct ttcatcatca
781cagggcagac atatacacga aaagtggata ttgaagtact gtctgtgctg gctagcttgg
841gggcatcagt gcacaagatt tgcaccgaca tacgcctcct ggcaaacctc aaggagatgg
901aggaaccctt tgaaaaacag cagattggct caagtgcgat gccatataag cggaatccca
961tgcgttcaga acgttgctgc agtcttgccc gccacctGAT GACCCTTGTC ATGGACCCGC
1021TACAGACAGC ATCTGTCCAG TGGTTTGAAC GCACACTGGA TGATAGTGCC AACCGACGGA
1081TCTGTTTGGC CGAGGCATTT CTTACCGCAG ATACTATATT GAATACGCTG CAGAACATTT
1141CTGAAGGATT GGTCGTGTAC CCCAAAGTAA TTGAACGGCG CATTCGGCAA GAGCTGCCTT
1201TCATGGCCAC AGAGAACATC ATCATGGCCA TGGTCAAAGC TGGAGGTAGC CGCCAGGATT
1261GCCATGAGAA AATCAGAGTG CTTTCTCAGC AGGCAGCTTC TGTGGTTAAG CAGGAAGGGG
1321GTGACAATGA CCTCATAGAG CGTATCCAGG TTGATGCCTA CTTCAGTCCC ATTCACTCCC
1381AGTTGGATCA TTTACTGGAT CCTTCTTCTT TCACTGGTCG TGCCTCCCAG CAGGTGCAGA
1441GATTCTTAGA AGAGGAGGTG TATCCCCTGT TAAAACCATA TGAAAGCGTG ATGAAGGTGA
1501AAGCAGAATT ATGTCTGTAC CCAACTTTCT TGTACAAAGT GGTTGATATC GGTAAGCCTA
1561TCCCTAACCC TCTCCTCGGT CTCGATTCTA CGTAGTAATG AACTAGTCCG TAACTTGAAA
1621GTATTTCGAT TTCTTGGCTT TATATATCTT GTGGAAAGGA CGAGCACGTT TTCGAGCTAT
1681GTGGATGACG CGTTAAGTCg acaatcaacc tctggattac aaaatttgtg aaagatt

Download FASTA (ORF) (Full)