Construct: ORF TRCN0000470625

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF004076.1_s317c1
Derived from:
ccsbBroadEn_03995
DNA Barcode:
ATCGGGCATCATCTCAAAGATCCC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
RTN4R (65078)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000470625
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 65078 RTN4R reticulon 4 receptor NM_023004.6 100% 100%
2 mouse 65079 Rtn4r reticulon 4 receptor NM_022982.2 83.1% 89.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1485
ORF length:
1419
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgaa gagggcgtcc gctggaggga gccggctgct ggcatgggtg ctgtggctgc
121aggcctggca ggtggcagcc ccatgcccag gtgcctgcgt atgctacaat gagcccaagg
181tgacgacaag ctgcccccag cagggcctgc aggctgtgcc cgtgggcatc cctgctgcca
241gccagcgcat cttcctgcac ggcaaccgca tctcgcatgt gccagctgcc agcttccgtg
301cctgccgcaa cctcaccatc ctgtggctgc actcgaatgt gctggcccga attgatgcgg
361ctgccttcac tggcctggcc ctcctggagc agctggacct cagcgataat gcacagctcc
421ggtctgtgga ccctgccaca ttccacggcc tgggccgcct acacacgctg cacctggacc
481gctgcggcct gcaggagctg ggcccggggc tgttccgcgg cctggctgcc ctgcagtacc
541tctacctgca ggacaacgcg ctgcaggcac tgcctgatga caccttccgc gacctgggca
601acctcacaca cctcttcctg cacggcaacc gcatctccag cgtgcccgag cgcgccttcc
661gtgggctgca cagcctcgac cgtctcctac tgcaccagaa ccgcgtggcc catgtgcacc
721cgcatgcctt ccgtgacctt ggccgcctca tgacactcta tctgtttgcc aacaatctat
781cagcgctgcc cactgaggcc ctggcccccc tgcgtgccct gcagtacctg aggctcaacg
841acaacccctg ggtgtgtgac tgccgggcac gcccactctg ggcctggctg cagaagttcc
901gcggctcctc ctccgaggtg ccctgcagcc tcccgcaacg cctggctggc cgtgacctca
961aacgcctagc tgccaatgac ctgcagggct gcgctgtggc caccggccct taccatccca
1021tctggaccgg cagggCCACC GATGAGGAGC CGCTGGGGCT TCCCAAGTGC TGCCAGCCAG
1081ATGCCGCTGA CAAGGCCTCA GTACTGGAGC CTGGAAGACC AGCTTCGGCA GGCAATGCGC
1141TGAAGGGACG CGTGCCGCCC GGTGACAGCC CGCCGGGCAA CGGCTCTGGC CCACGGCACA
1201TCAATGACTC ACCCTTTGGG ACTCTGCCTG GCTCTGCTGA GCCCCCGCTC ACTGCAGTGC
1261GGCCCGAGGG CTCCGAGCCA CCAGGGTTCC CCACCTCGGG CCCTCGCCGG AGGCCAGGCT
1321GTTCACGCAA GAACCGCACC CGCAGCCACT GCCGTCTGGG CCAGGCAGGC AGCGGGGGTG
1381GCGGGACTGG TGACTCAGAA GGCTCAGGTG CCCTACCCAG CCTCACCTGC AGCCTCACCC
1441CCCTGGGCCT GGCGCTGGTG CTGTGGACAG TGCTTGGGCC CTGCTGCCCA ACTTTCTTGT
1501ACAAAGTGGT TGATATCGGT AAGCCTATCC CTAACCCTCT CCTCGGTCTC GATTCTACGT
1561AGTAATGAAC TAGTCCGTAA CTTGAAAGTA TTTCGATTTC TTGGCTTTAT ATATCTTGTG
1621GAAAGGACGA ATCGGGCATC ATCTCAAAGA TCCCACGCGT TAAGTCgaca atcaacctct
1681ggattacaaa atttgtgaaa gatt

Download FASTA (ORF) (Full)