Construct: ORF TRCN0000470631

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF002809.1_s317c1
Derived from:
ccsbBroadEn_01193
DNA Barcode:
ACCCAATCCCCATTTAAAGCCACT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
SERPINE2 (5270)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000470631
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 5270 SERPINE2 serpin family E member 2 NM_006216.3 100% 100%
2 human 5270 SERPINE2 serpin family E member 2 XM_017004330.1 100% 100%
3 human 5270 SERPINE2 serpin family E member 2 NM_001136528.2 99.7% 99.4% 985_986insCAG
4 human 5270 SERPINE2 serpin family E member 2 XM_017004332.2 99.7% 99.4% 985_986insCAG
5 human 5270 SERPINE2 serpin family E member 2 XM_005246641.2 97% 97% 1_36del
6 human 5270 SERPINE2 serpin family E member 2 NM_001136530.1 96.8% 96.5% 1_36del;1021_1022insCAG
7 human 5270 SERPINE2 serpin family E member 2 NR_073116.1 44.4% 1_661del;1646_1647insCAG;1853_2674del
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1260
ORF length:
1194
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgaa ctggcatctc cccctcttcc tcttggcctc tgtgacgctg ccttccatct
121gctcccactt caatcctctg tctctcgagg aactaggctc caacacgggg atccaggttt
181tcaatcagat tgtgaagtcg aggcctcatg acaacatcgt gatctctccc catgggattg
241cgtcggtcct ggggatgctt cagctggggg cggacggcag gaccaagaag cagctcgcca
301tggtgatgag atacggcgta aatggagttg gtaaaatatt aaagaagatc aacaaggcca
361tcgtctccaa gaagaataaa gacattgtga cagtggctaa cgccgtgttt gttaagaatg
421cctctgaaat tgaagtgcct tttgttacaa ggaacaaaga tgtgttccag tgtgaggtcc
481ggaatgtgaa ctttgaggat ccagcctctg cctgtgattc catcaatgca tgggttaaaa
541atgaaaccag ggatatgatt gacaatctgc tgtccccaga tcttattgat ggtgtgctca
601ccagactggt cctcgtcaac gcagtgtatt tcaagggtct gtggaaatca cggttccaac
661ccgagaacac aaagaaacgc actttcgtgg cagccgacgg gaaatcctat caagtgccaa
721tgctggccca gctctccgtg ttccggtgtg ggtcgacaag tgcccccaat gatttatggt
781acaacttcat tgaactgccc TACCACGGGG AAAGCATCAG CATGCTGATT GCACTGCCGA
841CTGAGAGCTC CACTCCGCTG TCTGCCATCA TCCCACACAT CAGCACCAAG ACCATAGACA
901GCTGGATGAG CATCATGGTG CCCAAGAGGG TGCAGGTGAT CCTGCCCAAG TTCACAGCTG
961TAGCACAAAC AGATTTGAAG GAGCCGCTGA AAGTTCTTGG CATTACTGAC ATGTTTGATT
1021CATCAAAGGC AAATTTTGCA AAAATAACAA CAGGGTCAGA AAACCTCCAT GTTTCTCATA
1081TCTTGCAAAA AGCAAAAATT GAAGTCAGTG AAGATGGAAC CAAAGCTTCA GCAGCAACAA
1141CTGCAATTCT CATTGCAAGA TCATCGCCTC CCTGGTTTAT AGTAGACAGA CCTTTTCTGT
1201TTTTCATCCG ACATAATCCT ACAGGTGCTG TGTTATTCAT GGGGCAGATA AACAAACCCT
1261GCCCAACTTT CTTGTACAAA GTGGTTGATA TCGGTAAGCC TATCCCTAAC CCTCTCCTCG
1321GTCTCGATTC TACGTAGTAA TGAACTAGTC CGTAACTTGA AAGTATTTCG ATTTCTTGGC
1381TTTATATATC TTGTGGAAAG GACGAACCCA ATCCCCATTT AAAGCCACTA CGCGTTAAGT
1441Cgacaatcaa cctctggatt acaaaatttg tgaaagatt

Download FASTA (ORF) (Full)