Construct: ORF TRCN0000471372

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF008138.1_s317c1
Derived from:
ccsbBroadEn_09071
DNA Barcode:
CAAACGTAGTTTTACTCTATAGTT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
INTS14 (81556)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000471372
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 81556 INTS14 integrator complex subunit 14 NM_001366360.2 99.8% 99.8% 14T>G;1236G>A
2 human 81556 INTS14 integrator complex subunit 14 NM_001207058.3 90.2% 89.9% (many diffs)
3 human 81556 INTS14 integrator complex subunit 14 NM_001136043.3 84.6% 84.7% 0_1ins237;999G>A
4 human 81556 INTS14 integrator complex subunit 14 NM_001207059.3 84.6% 84.7% 0_1ins237;999G>A
5 human 81556 INTS14 integrator complex subunit 14 NM_001366364.2 84.6% 84.7% 0_1ins237;999G>A
6 human 81556 INTS14 integrator complex subunit 14 NM_001366365.2 84.6% 84.7% 0_1ins237;999G>A
7 human 81556 INTS14 integrator complex subunit 14 XM_006720711.2 84.6% 84.7% 0_1ins237;999G>A
8 human 81556 INTS14 integrator complex subunit 14 XM_011522101.2 84.6% 84.7% 0_1ins237;999G>A
9 human 81556 INTS14 integrator complex subunit 14 NR_045104.2 67.9% (many diffs)
10 human 81556 INTS14 integrator complex subunit 14 NR_045901.2 63.2% (many diffs)
11 human 81556 INTS14 integrator complex subunit 14 NR_045106.3 60% (many diffs)
12 human 81556 INTS14 integrator complex subunit 14 NR_045105.3 57.9% (many diffs)
13 mouse 69882 Ints14 integrator complex subunit 14 NM_001077631.2 90% 97.4% (many diffs)
14 mouse 69882 Ints14 integrator complex subunit 14 NM_175153.4 90% 97.4% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1620
ORF length:
1554
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgcc gacagtgggg gtaatggatg tatccctttc catgacccga cctgtgtcta
121ttgaggggtc cgaggaatac cagcgtaagc acctagcagc ccatggttta acgatgctgt
181ttgagcacat ggccacaaat tacaagcttg aatttacagc acttgtggtt ttttcatcac
241tttgggagtt gatggtcccc ttcacgagag attataatac cctacaggaa gcactaagta
301atatggatga ttatgacaaa acctgcttgg agtctgcatt agttggtgtt tgcaatatcg
361ttcagcaaga atggggtggt gcaattcctt gccaggttgt cctggtgaca gacggctgtc
421ttggcattgg tagagggtca ctgcgacatt ccctagccac tcaaaatcaa cgaagtgaga
481gcaacaggtt tccactacct tttcctttcc catctaagtt atatatcatg tgcatggcga
541atttggagga gctccagagc accgattcct tggaatgcct tgaacgtctc atagatttaa
601acaatggtga agggcagatt tttactattg atggccccct gtgcttgaag aatgtacagt
661ctatgtttgg aaaactgata gatttggcat atacgccttt ccatgctgtt ctcaagtgtg
721gccacctaac tgctgatgta caagtcttcc ccaggccaga accttttgtt gtagatgaag
781aaattgatcc tatccctaaa gtcattaaca cagatttgga aatagtggga tttattgata
841tagctgatat ttcaagtccc ccagttctgt ccagacatct ggtcttacct atagcactta
901acaaagaagg tgatgaggtg ggtactggca tcactgatga caatgaagat gaaaattcag
961ccaatcagat tgcaggcaaa atacccaact tttgtgtcct gctccatggt agcctaaaag
1021tggaaggaat ggtagcgatt gttcaattag gtcctgaatg gcatggaatg ctctactccc
1081aagctgacag caagaagaaa tcaaacctca tgatgtctct ctttgagcct ggcccagaac
1141ctctcccatg gctagggaaa atggcacagt tgggtccTAT TTCAGATGCT AAAGAAAACC
1201CTTATGGCGA GGATGACAAT AAGAGTCCAT TCCCCCTGCA GCCCAAAAAC AAACGCAGTT
1261ATGCCCAGAA TGTGACTGTC TGGATCAAAC CCAGCGGCCT ACAGACAGAT GTACAGAAGA
1321TTTTAAGAAA TGCAAGGAAA CTACCTGAAA AAACACAGAC ATTCTATAAG GAGCTGAACC
1381GTTTGCGAAA GGCCGCTCTA GCCTTTGGTT TCCTGGACCT GCTGAAAGGG GTGGCTGACA
1441TGCTGGAAAG GGAATGCACA CTGCTGCCTG AGACAGCCCA CCCTGATGCT GCATTCCAGC
1501TGACCCATGC TGCCCAGCAG CTCAAGCTGG CCAGTACCGG CACCTCTGAG TATGCCGCTT
1561ATGACCAGAA CATCACACCT TTGCACACGG ACTTCTCTGG GAGCAGCACT GAAAGAATTT
1621GCCCAACTTT CTTGTACAAA GTGGTTGATA TCGGTAAGCC TATCCCTAAC CCTCTCCTCG
1681GTCTCGATTC TACGTAGTAA TGAACTAGTC CGTAACTTGA AAGTATTTCG ATTTCTTGGC
1741TTTATATATC TTGTGGAAAG GACGACAAAC GTAGTTTTAC TCTATAGTTA CGCGTTAAGT
1801Cgacaatcaa cctctggatt acaaaatttg tgaaagatt

Download FASTA (ORF) (Full)