Construct: ORF TRCN0000472448

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF002298.1_s317c1
Derived from:
ccsbBroadEn_01443
DNA Barcode:
ATCTGACCCAGTCCAAGTCTTGCG
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
MRPL12 (6182)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000472448
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 6182 MRPL12 mitochondrial ribosomal pro... NM_002949.4 100% 100%
2 mouse 56282 Mrpl12 mitochondrial ribosomal pro... NM_027204.2 84% 84.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
660
ORF length:
594
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgct gccggcggcc gctcgccccc tgtgggggcc ttgccttggg cttcgggccg
121ctgcgttccg ccttgccagg cgacaggTGC CATGTGTCTG TGCCGTGCGA CATATGAGGA
181GCAGCGGCCA TCAGAGGTGT GAGGCCCTCG CTGGTGCACC CCTGGATAAC GCCCCCAAGG
241AGTACCCCCC CAAGATACAG CAGCTGGTCC AGGACATCGC CAGCCTCACT CTCTTGGAAA
301TCTCAGACCT CAACGAGCTC CTGAAGAAAA CGTTGAAGAT CCAGGATGTC GGGCTTGTGC
361CGATGGGTGG TGTGATGTCT GGGGCTGTCC CTGCTGCAGC AGCCCAGGAG GCGGTGGAAG
421AAGATATCCC CATAGCGAAA GAACGGACAC ATTTCACCGT CCGCCTGACC GAGGCGAAGC
481CCGTGGACAA AGTGAAGCTG ATCAAGGAAA TCAAGAACTA CATCCAAGGC ATCAACCTCG
541TCCAGGCAAA GAAGCTGGTG GAGTCCCTGC CCCAGGAAAT CAAAGCCAAT GTCGCCAAAG
601CTGAGGCGGA GAAGATCAAG GCGGCCCTGG AGGCGGTGGG CGGCACCGTG GTTCTGGAGT
661ACCCAACTTT CTTGTACAAA GTGGTTGATA TCGGTAAGCC TATCCCTAAC CCTCTCCTCG
721GTCTCGATTC TACGTAGTAA TGAACTAGTC CGTAACTTGA AAGTATTTCG ATTTCTTGGC
781TTTATATATC TTGTGGAAAG GACGAATCTG ACCCAGTCCA AGTCTTGCGA CGCGTTAAGT
841Cgacaatcaa cctctggatt acaaaatttg tgaaagatt

Download FASTA (ORF) (Full)