Construct: ORF TRCN0000472508

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF000415.1_s317c1
Derived from:
ccsbBroadEn_07159
DNA Barcode:
GGTGATACTGCGAACGACAATGGC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF75D (7626)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000472508
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 7626 ZNF75D zinc finger protein 75D NM_007131.5 99.9% 100% 1434G>A
2 human 7626 ZNF75D zinc finger protein 75D NM_001185063.2 81.3% 81.3% 410_411ins285;1149G>A
3 human 7626 ZNF75D zinc finger protein 75D XM_024452442.1 71.3% 55.3% 0_1ins346;257_258ins92;996G>A
4 human 7626 ZNF75D zinc finger protein 75D XM_017029819.2 71.1% 56.2% (many diffs)
5 human 7626 ZNF75D zinc finger protein 75D XM_011531395.3 69.9% 57.4% (many diffs)
6 human 7626 ZNF75D zinc finger protein 75D XM_011531396.3 66.9% 67% 0_1ins504;930G>A
7 human 7626 ZNF75D zinc finger protein 75D XM_011531397.3 66.4% 55.9% 0_1ins421;182_183ins92;921G>A
8 human 7626 ZNF75D zinc finger protein 75D XM_017029820.2 66.4% 55.9% 0_1ins421;182_183ins92;921G>A
9 human 7626 ZNF75D zinc finger protein 75D XM_005262471.3 59.3% 59.4% 0_1ins621;813G>A
10 human 7626 ZNF75D zinc finger protein 75D XM_024452443.1 48.3% 48.4% 0_1ins789;645G>A
11 human 7626 ZNF75D zinc finger protein 75D XM_024452444.1 48.3% 48.4% 0_1ins789;645G>A
12 human 7626 ZNF75D zinc finger protein 75D XM_024452445.1 48.3% 48.4% 0_1ins789;645G>A
13 human 7627 ZNF75A zinc finger protein 75a NM_153028.3 40% 35.8% (many diffs)
14 human 7627 ZNF75A zinc finger protein 75a XM_011522647.2 40% 35.8% (many diffs)
15 human 7626 ZNF75D zinc finger protein 75D XM_024452446.1 39.7% 39.8% 0_1ins921;513G>A
16 human 7627 ZNF75A zinc finger protein 75a NM_001352495.1 30.2% 28.4% (many diffs)
17 human 7627 ZNF75A zinc finger protein 75a NM_001352497.1 30.2% 28.4% (many diffs)
18 human 7627 ZNF75A zinc finger protein 75a NM_001352498.1 30.2% 28.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1599
ORF length:
1530
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat ggcgatgaga gagctgaacg cggattcatg ctcaagcccc cagatggggg
121ctatgtggga gactagtggg tctgtgaaag agaactccag tcagagtaag aaatacagca
181caaaaataga gaatcttggt cctgagagcg cttgcaggca cttctggagc ttccgttatc
241atgaagcaac cggaccgctt gagactatca gccaacttca gaaattgtgc catcagtggc
301tgaggccaga gatccactca aaagagcaga tcttggaaat gctggtgtta gagcagttcc
361tgagcattct gcccaaggag acccagaact gggtgcagaa gcatcatcca cagaatgtca
421aacaggctct ggtcctggtg gaattcttgc agagggagcc tgatggaaca aagaatgagg
481tcacagccca tgagctggga aaggaggcag tgctcttggg aggaacagca gtggccccag
541gcttcaagtg gaagccagca gagccccaac caatgggtgt gttccagaaa gaatattgga
601atacataccg ggtactacaa gaacagctgg gctggaacac tcacaaagaa acccagcctg
661tatatgaaag agctgtgcat gatcaacaga tgttagccct ttctgagcag aaaagaatca
721aacactggaa gatggcatct aaactcatcc tgcctgagtc cctgagtttg ttgacatttg
781aagatgtggc tgtgtatttt tctgaggaag agtggcaatt attgaatcct cttgagaaga
841ctctctacaa tgatgtaatg caggatatct atgagactgt catctctcta gggttaaagc
901taaaaaatga cactggaaat gatcatccta tatctgtttc tacatcagaa atacaaacat
961caggatgcga agtatcaaaa aagaccagaa tgaaaattgc ccagaaaaca atgggcaggg
1021aaaatcctgg tgatacacac agtgtacaga aatggcatcg agcttttcca aggaagaaaa
1081gaaagaaacc tgcaacttgt aaacaagagc ttccaaaact tatggatctt catgggaaag
1141gCCCCACAGG GGAGAAACCT TTTAAGTGTC AGGAATGTGG GAAAAGCTTC AGAGTTAGCT
1201CTGATCTTAT TAAACACCAC AGAATTCACA CTGGAGAGAA ACCCTATAAA TGTCAACAAT
1261GTGACAGGAG GTTTAGATGG AGTTCAGATC TTAATAAGCA CTTCATGACC CATCAAGGAA
1321TAAAACCATA TAGATGCTCA TGGTGTGGGA AAAGCTTTAG TCATAACACA AATCTACACA
1381CACACCAAAG AATTCACACA GGAGAGAAGC CCTTTAAATG TGATGAATGT GGAAAAAGAT
1441TCATTCAGAA CTCCCACCTT ATTAAACACC AGAGAACTCA CACAGGTGAG CAGCCTTATA
1501CATGTAGCTT ATGCAAGAGA AACTTTAGTA GGCGATCGAG CCTTCTTAGA CACCAGAAAC
1561TCCACAGAAG AAGGGAAGCA TGTCTAGTGT CTCCAAACTT GCCAACTTTC TTGTACAAAG
1621TGGTTGATAT CGGTAAGCCT ATCCCTAACC CTCTCCTCGG TCTCGATTCT ACGTAGTAAT
1681GAACTAGTCC GTAACTTGAA AGTATTTCGA TTTCTTGGCT TTATATATCT TGTGGAAAGG
1741ACGAGGTGAT ACTGCGAACG ACAATGGCAC GCGTTAAGTC gacaatcaac ctctggatta
1801caaaatttgt gaaagatt

Download FASTA (ORF) (Full)