Construct: ORF TRCN0000473369

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF005603.1_s317c1
Derived from:
ccsbBroadEn_07860
DNA Barcode:
CACTATGTTACCACATTCCCTTTG
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ARC (23237)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000473369
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 23237 ARC activity regulated cytoskel... NM_015193.5 99.9% 100% 858C>G
2 mouse 11838 Arc activity regulated cytoskel... NM_001276684.1 85.9% 92.9% (many diffs)
3 mouse 11838 Arc activity regulated cytoskel... NM_018790.3 85.9% 92.9% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1254
ORF length:
1188
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgga gctggaccac cggaccagcg gcgggctcca cgcctacccc gggccgcggg
121gcgggcaggt ggccaagccc aacgtgatcc tgcagatcgg gaagtgccgg gccgagatgc
181tggagcacgt gcggcggacg caccggcacc tgctggccga ggtgtccaag caggtggagc
241gcgagctgaa ggggctgcac cggtcggtcg ggaagctgga gagcaacctg gacggctacg
301tgcccacgag cgactcgcag cgctggaaga agtccatcaa ggcctgcctg tgccgctgcc
361aggagaccat cgccaacctg gagcgctggg tcaagcgcga gatgcacgtg tggcgcgagg
421tgttctaccg cctggagcgc tgggccgacc gcctggagtc cacgggcggc aagtacccgg
481tgggcagcga gtcagcccgc cacaccgttt ccgtgggcgt ggggggtccc gagagctact
541gccacgaggc agacggctac gactacaccg tcagccccta cgccatcacc ccgcccccag
601ccgctggcga gctgcccggg caggagcccg ccgaggccca gcagtaccag ccgtgggtcc
661ccggcgagga cgggcagccc agccccggcg tggacacgca gatcttcgag gaccctcgag
721agttcctgag ccacctagag gagtacttgc ggcaggtggg cggctctgag gagtactggc
781tgtcccagat ccagaatcac atgaacgggc cggccaagaa gtggtgGGAG TTCAAGCAGG
841GCTCCGTGAA GAACTGGGTG GAGTTCAAGA AGGAGTTCCT GCAGTACAGC GAGGGCACGC
901TGTCCCGAGA GGCCATCCAG CGGGAGCTGG ACCTGCCGCA GAAGCAGGGC GAGCCGCTGG
961ACCAGTTCCT GTGGCGCAAG CGGGACCTGT ACCAGACGCT CTACGTGGAC GCGGACGAGG
1021AGGAGATCAT CCAGTACGTG GTGGGCACCC TGCAGCCCAA GCTCAAGCGT TTCCTGCGCC
1081ACCCCCTGCC CAAGACCCTG GAGCAGCTCA TCCAGAGGGG CATGGAGGTG CAGGATGACC
1141TGGAGCAGGC GGCCGAGCCG GCCGGCCCCC ACCTCCCGGT GGAGGATGAG GCGGAGACCC
1201TCACGCCCGC CCCCAACAGC GAGTCCGTGG CCAGTGACCG GACCCAGCCC GAGTACCCAA
1261CTTTCTTGTA CAAAGTGGTT GATATCGGTA AGCCTATCCC TAACCCTCTC CTCGGTCTCG
1321ATTCTACGTA GTAATGAACT AGTCCGTAAC TTGAAAGTAT TTCGATTTCT TGGCTTTATA
1381TATCTTGTGG AAAGGACGAC ACTATGTTAC CACATTCCCT TTGACGCGTT AAGTCgacaa
1441tcaacctctg gattacaaaa tttgtgaaag att

Download FASTA (ORF) (Full)