Construct: ORF TRCN0000473405

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF018999.1_s317c1
Derived from:
ccsbBroadEn_14859
DNA Barcode:
CGGCTAAAATTGACTCAAGCCGTC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TEC (7006)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000473405
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 7006 TEC tec protein tyrosine kinase NM_003215.3 100% 100%
2 human 7006 TEC tec protein tyrosine kinase XM_024454193.1 100% 100%
3 human 7006 TEC tec protein tyrosine kinase XM_011513737.2 94.1% 92.8% (many diffs)
4 human 7006 TEC tec protein tyrosine kinase XM_017008569.1 81.6% 81.6% 0_1ins348
5 human 7006 TEC tec protein tyrosine kinase XM_011513741.1 73.8% 73% 1374_1375ins95;1398_1399ins400
6 human 7006 TEC tec protein tyrosine kinase XR_001741318.1 51.1% 1_45del;1514_1515ins65;1874_3509del
7 human 7006 TEC tec protein tyrosine kinase XR_925160.2 48.4% 1_45del;1418_1419ins160;1779_3414del
8 human 7006 TEC tec protein tyrosine kinase XR_001741319.1 45.4% 1_158del;1411_1412ins217;1835_3470del
9 mouse 21682 Tec tec protein tyrosine kinase NM_001113460.2 88.9% 95% (many diffs)
10 mouse 21682 Tec tec protein tyrosine kinase NM_001113464.2 88.9% 95% (many diffs)
11 mouse 21682 Tec tec protein tyrosine kinase XM_006503845.3 88.9% 95% (many diffs)
12 mouse 21682 Tec tec protein tyrosine kinase XM_006503846.3 88.9% 95% (many diffs)
13 mouse 21682 Tec tec protein tyrosine kinase XM_011240718.2 88.9% 95% (many diffs)
14 mouse 21682 Tec tec protein tyrosine kinase XM_011240719.2 88.9% 95% (many diffs)
15 mouse 21682 Tec tec protein tyrosine kinase NM_001113461.2 85.7% 91.7% (many diffs)
16 mouse 21682 Tec tec protein tyrosine kinase XM_006503847.2 84% 88.2% (many diffs)
17 mouse 21682 Tec tec protein tyrosine kinase XM_006503848.3 77.2% 81.2% (many diffs)
18 mouse 21682 Tec tec protein tyrosine kinase NM_013689.5 74% 77.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1962
ORF length:
1893
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat gaattttaac actattttgg aggagattct tattaaaagg tcacagcaga
121aaaagaagac atcgccctta aactacaaag agagactttt tgtacttaca aagtccatgc
181taacctacta tgagggtcga gcagagaaga aatacagaaa ggggtttatt gatgtttcaa
241aaatcaagtg tgtggaaata gtgaagaatg atgatggtgt cattccctgt caaaataagt
301atccatttca ggttgttcat gatgctaaca cactttacat ttttgcacct agtccacaaa
361gcagggacct gtgggtgaag aagttaaaag aagaaataaa gaacaacaat aatattatga
421ttaaatatca tcctaaattc tggacagatg gaagttatca gtgttgtaga caaactgaaa
481aattagcacc cggatgtgaa aaatacaatc tttttgagag cagtataaga aaagcactac
541ctccagcacc agaaacaaag aagcgaaggc ctcccccacc aattccacta gaagaagaag
601ataatagtga agaaatcgtt gtagccatgt atgatttcca agcagcagaa ggacatgatc
661tcagattaga gagaggccaa gagtatctca ttttagaaaa gaatgatgtt cattggtgga
721gagcaagaga taaatatggg aatgaaggat atatcccaag taattacgta acgggaaaga
781aatcaaacaa cttagatcaa tatgaatggt attgcagaaa tatgaataga agcaaggcag
841agcaactcct ccgcagtgaa gataaagaag gtggttttat ggtaagggat tccagtcaac
901caggcttgta cacagtctcc ctttatacca agtttggagg agaaggttca tcgggtttta
961ggcattatca tataaaggaa acaacaacat ctccaaagaa gtattaccta gctgaaaaac
1021atgcttttgg ctccattcct gagattattg aatatcataa gcacaatgca gcaggacttg
1081tcaccaggct tcggtaccca gttagtgtga aagggaagaa tgcacccacc actgcaggat
1141tcagctatga gaaatgggag attaaccctt cagaactgac ctttatgagg gaattgggaa
1201gtggactgtt tggagtggtg aggcttggca aatggcgagc ccagtacaaa gtcgcaatca
1261aagctattcg ggaaggtgca atgtgcgagg aggactttat agaagaagct aaagtgatga
1321tgaaactgac acacccgaag ttagtgcagc tttatggtgt gtgcacccag cagaaaccaa
1381tatacattgt tactgagttc atggaaaggg gctgccttct gaatttcctc cgacagagac
1441aaggtcattt cagtagagac gtactgctga gcatgtgtca ggatgtgtgt gaagggatgg
1501agtatcTGGA GAGAAACAGC TTCATCCACA GAGATCTGGC TGCCAGAAAT TGTCTAGTAA
1561GTGAGGCGGG AGTTGTAAAA GTATCTGATT TTGGAATGGC CAGGTATGTT CTGGATGATC
1621AGTACACAAG TTCTTCTGGT GCTAAGTTTC CTGTGAAGTG GTGTCCACCT GAAGTGTTTA
1681ATTACAGCCG CTTCAGCAGC AAATCAGATG TCTGGTCATT TGGTGTTTTA ATGTGGGAAG
1741TATTCACGGA AGGCAGAATG CCTTTTGAAA AATACACCAA TTATGAAGTG GTAACCATGG
1801TTACTCGAGG CCACCGACTC TACCAGCCGA AGTTGGCGTC CAACTATGTG TATGAGGTGA
1861TGCTGAGATG TTGGCAGGAG AAACCAGAGG GAAGGCCTTC TTTCGAAGAT CTGCTGCGCA
1921CAATAGATGA ACTAGTTGAA TGTGAAGAAA CTTTTGGAAG ACCAACTTTC TTGTACAAAG
1981TGGTTGATAT CGGTAAGCCT ATCCCTAACC CTCTCCTCGG TCTCGATTCT ACGTAGTAAT
2041GAACTAGTCC GTAACTTGAA AGTATTTCGA TTTCTTGGCT TTATATATCT TGTGGAAAGG
2101ACGACGGCTA AAATTGACTC AAGCCGTCAC GCGTTAAGTC gacaatcaac ctctggatta
2161caaaatttgt gaaagatt

Download FASTA (ORF) (Full)