Construct: ORF TRCN0000474012

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF006589.1_s317c1
Derived from:
ccsbBroadEn_01541
DNA Barcode:
TTTCATTGCGAGTACTGAATATAT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
SLC2A3 (6515)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000474012
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 6515 SLC2A3 solute carrier family 2 mem... NM_006931.3 100% 100%
2 human 144195 SLC2A14 solute carrier family 2 mem... NM_001286234.2 96.5% 94.3% (many diffs)
3 human 144195 SLC2A14 solute carrier family 2 mem... NM_001286235.2 96.5% 94.3% (many diffs)
4 human 144195 SLC2A14 solute carrier family 2 mem... XM_005253315.4 96.5% 94.3% (many diffs)
5 human 144195 SLC2A14 solute carrier family 2 mem... XM_005253317.5 96.5% 94.3% (many diffs)
6 human 144195 SLC2A14 solute carrier family 2 mem... XM_011520562.1 96.5% 94.3% (many diffs)
7 human 144195 SLC2A14 solute carrier family 2 mem... XM_011520563.2 96.5% 94.3% (many diffs)
8 human 144195 SLC2A14 solute carrier family 2 mem... XM_017018846.1 96.5% 94.3% (many diffs)
9 human 144195 SLC2A14 solute carrier family 2 mem... XM_017018847.1 96.5% 94.3% (many diffs)
10 human 144195 SLC2A14 solute carrier family 2 mem... XM_024448849.1 96.5% 94.3% (many diffs)
11 human 144195 SLC2A14 solute carrier family 2 mem... NM_001286233.2 92.3% 90.1% (many diffs)
12 human 144195 SLC2A14 solute carrier family 2 mem... NM_153449.4 92.3% 90.1% (many diffs)
13 human 144195 SLC2A14 solute carrier family 2 mem... XM_017018841.1 92.1% 90% (many diffs)
14 human 144195 SLC2A14 solute carrier family 2 mem... XM_017018844.1 92.1% 90% (many diffs)
15 human 144195 SLC2A14 solute carrier family 2 mem... XM_017018845.2 92.1% 90% (many diffs)
16 human 144195 SLC2A14 solute carrier family 2 mem... XM_024448848.1 92.1% 90% (many diffs)
17 human 144195 SLC2A14 solute carrier family 2 mem... NM_001286237.2 89.7% 87.5% (many diffs)
18 human 144195 SLC2A14 solute carrier family 2 mem... NM_001286236.2 80.3% 78% (many diffs)
19 human 144195 SLC2A14 solute carrier family 2 mem... XM_011520564.2 80.3% 78% (many diffs)
20 human 144195 SLC2A14 solute carrier family 2 mem... XM_011520565.2 80.3% 78% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1554
ORF length:
1488
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatggg gacacagaag gtcaccccag ctctgatatt tgccatcaca gttgctacaa
121tcggctcttt ccaatttggc tacaacactg gggtcatcaa tgctcctgag aagatcataa
181aggaatttat caataaaact ttgacggaca agggaaatgc cccaccctct gaggtgctgc
241tcacgtctct ctggtccttg tctgtggcca tattttccgt cgggggtatg atcggctcct
301tttccgtcgg actcttcgtc aaccgctttg gcaggcgcaa ttcaatgctg attgtcaacc
361tgttggctgt cactggtggc tgctttatgg gactgtgtaa agtagctaag tcggttgaaa
421tgctgatcct gggtcgcttg gttattggcc tcttctgcgg actctgcaca ggttttgtgc
481ccatgtacat tggagagatc tcgcctactg ccctgcgggg tgcctttggc actctcaacc
541agctgggcat cgttgttgga attctggtgg cccagatctt tggtctggaa ttcatccttg
601ggtctgaaga gctatggccg ctgctactgg gttttaccat ccttcctgct atcctacaaa
661gtgcagccct tccattttgc cctgaaagtc ccagattttt gctcattaac agaaaagaag
721aggagaatgc taagcagatc ctccagcggt tgtggggcac ccaggatgta tcccaagaca
781tccaggagat gaaagatgag agtgcaagga tgtcacaaga aaagcaagtc accgtgctag
841agctctttag agtgtccagc taccgacagc ccatcatcat ttccattgtg ctccagctct
901ctcagcagct ctctgggatc aatgctgtgt tctattactc aacaggaatc ttcaaggatg
961caggtgttca agagcccatc tatgccacca tcggcgcggg tgtggttaat actatcttca
1021ctgtagtttc tctatttctg gtggaaaggg caggaagaag gactctgcat atgataggcc
1081ttggagggat ggctttttgt tcCACGCTCA TGACTGTTTC TTTGTTATTA AAGGATAACT
1141ATAATGGGAT GAGCTTTGTC TGTATTGGGG CTATCTTGGT CTTTGTAGCC TTCTTTGAAA
1201TTGGACCAGG CCCCATTCCC TGGTTTATTG TGGCCGAACT CTTCAGCCAG GGCCCCCGCC
1261CAGCTGCGAT GGCAGTGGCC GGCTGCTCCA ACTGGACCTC CAACTTCCTA GTCGGATTGC
1321TCTTCCCCTC CGCTGCTCAC TATTTAGGAG CCTACGTTTT TATTATCTTC ACCGGCTTCC
1381TCATTACCTT CTTGGCTTTT ACCTTCTTCA AAGTCCCTGA GACCCGTGGC AGGACTTTTG
1441AGGATATCAC ACGGGCCTTT GAAGGGCAGG CACACGGTGC AGATAGATCT GGAAAGGACG
1501GCGTCATGGA GATGAACAGC ATCGAGCCTG CTAAGGAGAC CACCACCAAT GTCTACCCAA
1561CTTTCTTGTA CAAAGTGGTT GATATCGGTA AGCCTATCCC TAACCCTCTC CTCGGTCTCG
1621ATTCTACGTA GTAATGAACT AGTCCGTAAC TTGAAAGTAT TTCGATTTCT TGGCTTTATA
1681TATCTTGTGG AAAGGACGAT TTCATTGCGA GTACTGAATA TATACGCGTT AAGTCgacaa
1741tcaacctctg gattacaaaa tttgtgaaag att

Download FASTA (ORF) (Full)