Construct: ORF TRCN0000474218

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF017189.1_s317c1
Derived from:
ccsbBroadEn_04067
DNA Barcode:
CCTGTACGTTCTTAGATCACAACT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
THTPA (79178)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000474218
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 79178 THTPA thiamine triphosphatase NM_001126339.3 100% 100%
2 human 79178 THTPA thiamine triphosphatase NM_024328.6 100% 100%
3 human 79178 THTPA thiamine triphosphatase NM_001256322.2 60.8% 60.8% 277_278ins270
4 human 79178 THTPA thiamine triphosphatase NM_001256323.2 60.8% 60.8% 277_278ins270
5 human 79178 THTPA thiamine triphosphatase NM_001256062.2 44.5% 41.3% (many diffs)
6 human 79178 THTPA thiamine triphosphatase NM_001256321.2 44.5% 41.3% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
756
ORF length:
690
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61tcggcatggc ccagggcttg attgaggtgg agcgaaagtt ccttccaggg cctggcacag
121aggagcggct gcaggagttg gggggcaccc tggagtaccg ggtcaccttc cgagacacct
181actatgacac ccctgagctg agcctcatgc aggctgacca ctggctgcga cgacgagagg
241atagtggatg ggagctcaaa tgtcctGGAG CAGCAGGTGT CTTAGGACCC CACACGGAGT
301ATAAGGAACT CACAGCGGAA CCTACAATTG TGGCCCAACT CTGTAAGGTG CTGCGGGCTG
361ACGGCCTGGG GGCTGGAGAT GTGGCTGCTG TGCTGGGCCC ACTGGGGCTG CAGGAAGTAG
421CTAGTTTTGT GACTAAGCGG AGTGCCTGGA AGCTGGTGCT CTTGGGAGCT GATGAAGAGG
481AGCCACAGCT CAGGGTGGAC TTGGATACAG CCGACTTTGG CTACGCTGTG GGTGAGGTAG
541AGGCCCTGGT GCATGAGGAG GCTGAAGTAC CAACTGCCCT AGAGAAGATC CACAGGCTCA
601GCAGCATGCT TGGTGTGCCT GCACAGGAGA CAGCACCAGC CAAGCTGATT GTGTATCTAC
661AGCGTTTCCG GCCTCAAGAC TATCAGCGCC TGCTAGAAGT GAACAGCTCC AGAGAGAGGC
721CACAGGAGAC TGAAGATCCT GACCACTGCC TGGGCTACCC AACTTTCTTG TACAAAGTGG
781TTGATATCGG TAAGCCTATC CCTAACCCTC TCCTCGGTCT CGATTCTACG TAGTAATGAA
841CTTGAAAGTA TTTCGATTTC TTGGCTTTAT ATATCTTGTG GAAAGGACGA CCTGTACGTT
901CTTAGATCAC AACTACGCGT TAAGTCgaca atcaacctct ggattacaaa atttgtgaaa
961gatt

Download FASTA (ORF) (Full)