Construct: ORF TRCN0000474476

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF016987.1_s317c1
Derived from:
ccsbBroadEn_03891
DNA Barcode:
CGTTGATTTGAAAGACCTAAAAAC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
AASDHPPT (60496)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000474476
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 60496 AASDHPPT aminoadipate-semialdehyde d... NM_015423.3 100% 100%
2 human 60496 AASDHPPT aminoadipate-semialdehyde d... XM_024448641.1 48.3% 43.7% (many diffs)
3 mouse 67618 Aasdhppt aminoadipate-semialdehyde d... NM_026276.3 87.6% 90.9% (many diffs)
4 mouse 67618 Aasdhppt aminoadipate-semialdehyde d... NM_001326359.1 71.8% 74.7% (many diffs)
5 mouse 67618 Aasdhppt aminoadipate-semialdehyde d... XM_006509877.3 53.9% 55.6% (many diffs)
6 mouse 67618 Aasdhppt aminoadipate-semialdehyde d... XM_017313535.1 46% 46.2% (many diffs)
7 mouse 67618 Aasdhppt aminoadipate-semialdehyde d... XM_017313536.1 46% 46.2% (many diffs)
8 mouse 67618 Aasdhppt aminoadipate-semialdehyde d... NR_136940.1 27.2% (many diffs)
9 mouse 67618 Aasdhppt aminoadipate-semialdehyde d... NR_136941.1 23.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
993
ORF length:
927
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatggt tttccctgcc aaacggttct gcttggtgcc atccatggag ggcgtgcgct
121gggccttttc ctgcggcact tggctgccga gccgagccga atggctgctg gcagtgcgat
181cgattcagcc cgaggagaag gagcgcattg gccagttcgt ctttgcccgg gacgctaagg
241cagccatggc tggtcgtctg atgataagga aattagttgc agagaaattg aatatccctt
301ggaatcatat tcgtttgcaa agaactgcaa aaggaaaacc agttcttgca aaggactcat
361cgaatcctta cccgaatttc aactttaaca tctctcatca aggagactat gcagtgcttg
421ctgctgaacc tgagctgcaa gttggaattg atataatgaa gactagtttt ccaggtcgtG
481GTTCAATTCC AGAATTCTTT CATATTATGA AAAGAAAGTT TACCAACAAA GAATGGGAAA
541CAATCAGAAG CTTTAAGGAT GAGTGGACTC AGCTGGATAT GTTTTATAGG AATTGGGCAC
601TTAAGGAAAG CTTCATAAAA GCCATTGGTG TTGGACTAGG ATTTGAATTG CAGCGGCTTG
661AATTTGATCT ATCTCCATTA AACTTGGATA TAGGCCAAGT TTATAAAGAA ACACGTTTAT
721TCCTGGATGG AGAGGAAGAA AAAGAATGGG CATTTGAGGA AAGCAAAATA GATGAGCACC
781ATTTTGTTGC AGTTGCTCTT AGGAAACCCG ATGGATCTAG ACATCAGGAT GTTCCATCTC
841AGGATGATTC CAAACCAACC CAGAGGCAAT TTACTATTCT CAACTTTAAT GATTTAATGT
901CATCTGCCGT TCCCATGACA CCTGAAGATC CTTCATTTTG GGACTGTTTT TGCTTCACAG
961AAGAAATTCC AATACGAAAT GGTACAAAGT CATGCCCAAC TTTCTTGTAC AAAGTGGTTG
1021ATATCGGTAA GCCTATCCCT AACCCTCTCC TCGGTCTCGA TTCTACGTAG TAATGAACTA
1081GTCCGTAACT TGAAAGTATT TCGATTTCTT GGCTTTATAT ATCTTGTGGA AAGGACGACG
1141TTGATTTGAA AGACCTAAAA ACACGCGTTA AGTCgacaat caacctctgg attacaaaat
1201ttgtgaaaga tt

Download FASTA (ORF) (Full)