Construct: ORF TRCN0000475367

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF009257.1_s317c1
Derived from:
ccsbBroadEn_08112
DNA Barcode:
AGGGCCACCATGGAACCACCTTTA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TMEM208 (29100)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000475367
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 29100 TMEM208 transmembrane protein 208 NM_014187.4 99.8% 99.4% 244G>T
2 human 29100 TMEM208 transmembrane protein 208 NR_134524.2 64.5% (many diffs)
3 human 29100 TMEM208 transmembrane protein 208 NM_001318217.2 59.3% 58.9% 0_1ins210;34G>T
4 mouse 66320 Tmem208 transmembrane protein 208 NM_025486.2 90.3% 95.3% (many diffs)
5 mouse 66320 Tmem208 transmembrane protein 208 XM_006531274.3 87.3% 91.6% (many diffs)
6 mouse 66320 Tmem208 transmembrane protein 208 XM_006531275.3 51.8% 54.9% (many diffs)
7 mouse 66320 Tmem208 transmembrane protein 208 XM_006531276.3 51.8% 54.9% (many diffs)
8 mouse 66320 Tmem208 transmembrane protein 208 XM_006531277.3 51.8% 54.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
585
ORF length:
519
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatggc gcccaagggc aaagtgggca cgagagggaa gaagcagata tttgaagaga
121acagagagac tctgaagttc tacctgcgga tcatactggg ggccaatgcc atttactgcc
181ttgtgacgtt ggtcttcttt tactcatctg cctcattttg ggcctggttg gccctgggct
241ttagtctggc agtgtatggg gccagctacc actctatgag ctcgatggca cgagcagcgt
301tctctgagta tggggccctg atggatggtg gcatggacct caacatggag cagggcatgg
361cagagcacct taaggatgtg atcctactga cagccatcgt gcaggtgctc agctgcttct
421ctctctatgt cTGGTCCTTC TGGCTTCTGG CTCCAGGCCG GGCCCTTTAC CTCCTGTGGG
481TGAATGTGCT GGGCCCCTGG TTCACTGCAG ACAGTGGCAC CCCAGCACCA GAGCACAATG
541AGAAACGGCA GCGCCGACAG GAGCGGCGGC AGATGAAGCG GTTATACCCA ACTTTCTTGT
601ACAAAGTGGT TGATATCGGT AAGCCTATCC CTAACCCTCT CCTCGGTCTC GATTCTACGT
661AGTAATGAAC TAGTCCGTAA CTTGAAAGTA TTTCGATTTC TTGGCTTTAT ATATCTTGTG
721GAAAGGACGA AGGGCCACCA TGGAACCACC TTTAACGCGT TAAGTCgaca atcaacctct
781ggattacaaa atttgtgaaa gatt

Download FASTA (ORF) (Full)