Construct: ORF TRCN0000475534

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF006173.1_s317c1
Derived from:
ccsbBroadEn_07206
DNA Barcode:
TTTGGTTTATTTCAGTCCTTCAGC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
SLC14A2 (8170)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000475534
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 8170 SLC14A2 solute carrier family 14 me... NM_001242692.2 99.8% 99.6% (many diffs)
2 human 8170 SLC14A2 solute carrier family 14 me... NM_001371319.1 99.8% 99.6% (many diffs)
3 human 8170 SLC14A2 solute carrier family 14 me... NM_007163.4 99.8% 99.6% (many diffs)
4 human 8170 SLC14A2 solute carrier family 14 me... XM_024451270.1 99.8% 99.6% (many diffs)
5 human 8170 SLC14A2 solute carrier family 14 me... XM_024451271.1 99.8% 99.6% (many diffs)
6 human 8170 SLC14A2 solute carrier family 14 me... XM_017026016.2 94.9% 94.7% (many diffs)
7 mouse 27411 Slc14a2 solute carrier family 14 (u... NM_207651.3 84.4% 84.5% (many diffs)
8 mouse 27411 Slc14a2 solute carrier family 14 (u... NM_001110273.1 37.6% 39.1% (many diffs)
9 mouse 27411 Slc14a2 solute carrier family 14 (u... NM_001110274.1 30.1% 30.1% (many diffs)
10 mouse 27411 Slc14a2 solute carrier family 14 (u... XM_017317915.1 28.7% 25.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
2829
ORF length:
2760
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat gtctgacccc cacagcagtc ctctcctgcc agagccactt tccagcagat
121acaaactcta cgaggcagag tttaccagcc cgagctggcc ctcgacatcc ccggatactc
181acccagctct gcccctcctg gaaatgcctg aagaaaagga tctccggtct tccaatgaag
241acagtcacat tgtgaagatc gaaaagctca atgaaaggag taaaaggaaa gacgacgggg
301tggcccatcg ggactcagca ggccaaaggt gcatctgcct ctccaaagca gtgggctacc
361tcacgggcga catgaaggag tacaggatct ggctgaaaga caagcacctt gccctccagt
421tcatagactg ggtcctgaga gggaccgctc aggtgatgtt cgtcaacaat cctctcagcg
481gcctcatcat cttcataggg ctgctgatcc agaatccctg gtggacaatc actgggggcc
541tggggacagt ggtctcgacc ttaacagctc tcgccttggg ccaagacagg tctgccattg
601cctcaggact ccatgggtac aacgggatgc tggtgggact gctgatggcc gtgttctcgg
661agaagttaga ctactactgg tggcttctgt ttcctgtgac cttcacagcc atgtcctgcc
721cagttctttc tagtgccttg aattccatct tcagcaagtg ggacctcccg gtcttcactc
781tgcccttcaa cattgcagtc accttgtacc ttgcagccac aggccactac aacctcttct
841tccccacaac actggtagag cctgtgtctt cagtgcccaa tatcacctgg acagagatgg
901aaatgcccct gctgttacaa gccatccctg ttggggtcgg ccaggtgtat ggctgtgaca
961atccctggac aggcggcgtg ttcctggtgg ctctgttcat ctcctcgcca ctcatctgct
1021tgcatgcagc cattggctca atcgtggggc tgctagcagc cctgtcagtg gccacaccct
1081tcgagaccat ctacacaggc ctctggagct acaactgcgt cctctcctgc atcgccatcg
1141gaggcatgtt ctatgccctc acctggcaga ctcacctgct ggccctcatc tgtgccctgt
1201tctgtgcata catggaagca gccatctcca acatcatgtc agtggtgggc gtgccaccag
1261gcacctgggc cttctgcctt gccaccatca tcttcctgct cctgacgaca aacaacccag
1321ccatcttcag actcccactc agcaaagtca cctaccccga ggccaaccgc atctactacc
1381tgacagtgaa aagcggtgaa gaagagaagg cccccagcgg aggcggtggg gagcatccac
1441ccacagcagg cccaaaggtg gaggagggct cggaggctgt gctctccaag cacaggagtg
1501tatttcacat cgagtggtca tccattcgga ggaggagcaa agtgtttgga aaaggcgaac
1561accaggaaag acaaaacaaa gacccatttc cctatcaata ccggaagccc acagtcgagc
1621tgcttgatct ggacaccatg gaggagagct ctgagataaa agtggaaaca aacatttcca
1681agacatcctg gattcggagt tccatggctg ccagtgggaa aagggtgagc aaagccctca
1741gctacatcac aggagagatg aaggagtgtg gagagggact taaagacaag tccccagtgt
1801tccagttctt tgactgggtc ctccgaggca catctcaagt gatgtttgtg aacaaccccc
1861tcagcggcat cctcatcatc ctcggcctct tcatccagaa cccctggtgg gcgatctcag
1921gctgcctggg taccatcatg tccaccttga cagccctcat cctgagtcag gacaagtcgg
1981ccatcgctgc aggatttcac ggctacaatg gggtgctggt ggggctgctg atggccgtgt
2041tctcagacaa aggtgactac tactggtggc tgttgctacc cgtcatcatc atgtccatgt
2101cttgccccat cctctccagt gccctgggta ccatcttcag caagtgggac ctcccagtct
2161tcacactgcc cttcaatatc actgtgactt tgtacctggc agccacgggc cactacaacc
2221ttttcttccc cacaacgctg ctgcagcctg catccgccat gcccaacatc acctggtcag
2281aggtccaagt gcccttgctt ttgagagcca tccccgttgg aattggccaa gtgtacggct
2341gtgataaccc ctggactgga ggcatcttcc tcatagctct gttcatatcc tcacctctca
2401tttgcttgca tgcagcaatt ggatccacca tggggatgct agcagcactc actattgcga
2461cgccctttga ctccatctac ttcggcctgt gtggcttcaa cagcaccctc gcatgcatag
2521cgataggagg catgttctac gtcatcacct ggcagacgca cctCCTCGCC ATCGCCTGCG
2581CACTGTTTGC TGCCTACCTG GGTGCTGCCC TGGCTAACAT GTTATCTGTG TTTGGATTGC
2641CGCCCTGCAC TTGGCCCTTC TGTCTCTCAG CTCTCACCTT CCTGCTCCTG ACGACCAATA
2701ACCCCACCAT CTACAAGCTC CCGCTCAGCA AAGTCACCTA CCCAGAGGCC AACCGCATCT
2761ACTACCTGTC CCAGGAGAGA AACAGAAGGG CATCAATCAT AACAAAGTAT CAGGCCTACG
2821ATGTCTCCTT GCCAACTTTC TTGTACAAAG TGGTTGATAT CGGTAAGCCT ATCCCTAACC
2881CTCTCCTCGG TCTCGATTCT ACGTAGTAAT GAACTAGTCC GTAACTTGAA AGTATTTCGA
2941TTTCTTGGCT TTATATATCT TGTGGAAAGG ACGATTTGGT TTATTTCAGT CCTTCAGCAC
3001GCGTTAAGTC gacaatcaac ctctggatta caaaatttgt gaaagatt

Download FASTA (ORF) (Full)