Construct: ORF TRCN0000475824

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF006524.1_s317c1
Derived from:
ccsbBroadEn_02142
DNA Barcode:
TCTAGGGCTACTAGATCGGGCCGG
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
B4GALT5 (9334)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000475824
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 9334 B4GALT5 beta-1,4-galactosyltransfer... NM_004776.4 100% 100%
2 mouse 56336 B4galt5 UDP-Gal:betaGlcNAc beta 1,4... NM_019835.2 87.4% 95.1% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1233
ORF length:
1164
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat gcgcgcccgc cgggggctgc tgcggctgcc gcgccgctcg ctgctcgccg
121cgctcttctt cttttctctc tcgtcctcgc tgctgtactt cgtctatgtg gcgcccggca
181tagtgaacac ctacctcttc atgatgcaag cccaaggcat tctgatccgg gacaacgtga
241gaacaatcgg tgctcaggtt tatgagcagg tgcttcggag tgcttatgcc aagaggaaca
301gcagtgtaaa tgactcagat tatcctcttg acttgaacca cagtgaaacc ttcctgcaaa
361ctacaacatt tcttcctgaa gacttcacct actttgcaaa ccatacctgc cctgaaagac
421tcccttccat gaagggccca atagacataa acatgagtga aattggaatg gattacattc
481atgaactctt ctccaaagac ccaaccatca agctcggagg tcactggaag ccttctgatt
541gcatgcctcg gtggaaggtg gcgatcctta tccccttccg gaaccgccac gagcacctcc
601cagtcctgtt cagacacctg cttcccatgc tccagcgcca gcgcttgcag tttgcatttt
661atgtggttga acaagttggt acccaaccct ttaatcgagc catgcttttc aacgttggct
721ttcaagaggc aatgaaagac ttggattggg actgtttgat ttttcatgat gtagatcaca
781taccggaaag tgatcgcaac tattatggat gtggacagat gccgaggcat tttgcaacca
841aattggataa gtatatgtat ctgcttcctt ataccgagtt ctttGGCGGA GTGAGTGGCT
901TAACAGTGGA ACAATTTCGG AAAATCAATG GCTTTCCTAA TGCTTTCTGG GGTTGGGGTG
961GAGAAGATGA CGACCTCTGG AACAGAGTAC AGAATGCAGG CTATTCTGTG AGCCGGCCAG
1021AGGGTGACAC AGGAAAGTAC AAGTCCATTC CTCATCACCA TCGAGGAGAA GTCCAGTTTC
1081TTGGAAGGTA TGCTCTGCTG AGGAAGTCAA AAGAACGGCA AGGGCTGGAT GGCCTCAACA
1141ACCTGAACTA CTTTGCAAAC ATCACATACG ACGCCTTGTA TAAAAACATA ACTGTCAACC
1201TGACACCCGA GCTGGCTCAG GTGAACGAGT ACTTGCCAAC TTTCTTGTAC AAAGTGGTTG
1261ATATCGGTAA GCCTATCCCT AACCCTCTCC TCGGTCTCGA TTCTACGTAG TAATGAACTA
1321GTCCGTAACT TGAAAGTATT TCGATTTCTT GGCTTTATAT ATCTTGTGGA AAGGACGATC
1381TAGGGCTACT AGATCGGGCC GGACGCGTTA AGTCgacaat caacctctgg attacaaaat
1441ttgtgaaaga tt

Download FASTA (ORF) (Full)