Construct: ORF TRCN0000475967

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF010383.1_s317c1
Derived from:
ccsbBroadEn_04561
DNA Barcode:
GTGGCCAGCGACCTAGCGTTCGGT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
NXPE3 (91775)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000475967
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 91775 NXPE3 neurexophilin and PC-estera... NM_001134456.2 100% 100%
2 human 91775 NXPE3 neurexophilin and PC-estera... NM_001348990.2 100% 100%
3 human 91775 NXPE3 neurexophilin and PC-estera... NM_001348991.2 100% 100%
4 human 91775 NXPE3 neurexophilin and PC-estera... NM_001348992.2 100% 100%
5 human 91775 NXPE3 neurexophilin and PC-estera... NM_001348993.2 100% 100%
6 human 91775 NXPE3 neurexophilin and PC-estera... NM_001348994.2 100% 100%
7 human 91775 NXPE3 neurexophilin and PC-estera... NM_001348995.2 100% 100%
8 human 91775 NXPE3 neurexophilin and PC-estera... NM_145037.4 100% 100%
9 human 91775 NXPE3 neurexophilin and PC-estera... NM_001348996.2 87.6% 87.6% 920_921ins207
10 human 91775 NXPE3 neurexophilin and PC-estera... NM_001348997.2 87.6% 87.6% 920_921ins207
11 human 91775 NXPE3 neurexophilin and PC-estera... NM_001348998.2 87.6% 87.6% 920_921ins207
12 human 91775 NXPE3 neurexophilin and PC-estera... NR_145993.2 18.7% 1_611del;1457_1458ins74;2215_8494del
13 mouse 385658 Nxpe3 neurexophilin and PC-estera... NM_001134457.1 85.2% 88.5% (many diffs)
14 mouse 385658 Nxpe3 neurexophilin and PC-estera... XM_006522325.3 85.2% 88.5% (many diffs)
15 mouse 385658 Nxpe3 neurexophilin and PC-estera... XM_011245941.2 82.1% 85.1% (many diffs)
16 mouse 385658 Nxpe3 neurexophilin and PC-estera... XM_011245942.2 82.1% 85.1% (many diffs)
17 mouse 385658 Nxpe3 neurexophilin and PC-estera... XM_011245943.2 82.1% 85.1% (many diffs)
18 mouse 385658 Nxpe3 neurexophilin and PC-estera... XM_011245944.2 82.1% 85.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1743
ORF length:
1677
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgtg gaccaatttc ttcaaactac ggcttttctg ctgtctgctt gcagtgttga
121tggtggtggt gctggtcatc aatgttactc aggtagagta cttggaccat gagactgttt
181cagccacttt catcgacagc agtggacagt ttgtttcctc ccaggtgaca ggaattagcc
241gaaatcccta ctgtggctat gatcagcaga ccctgtccag ccaggagcgc atggaggagg
301actccttgct ggctgccttg caccggcagg ttcctgatgt gggcccagtc ccctttgtga
361agagcactga cccttcttcc agctactttg tcatcttgaa ctctgctgcc ttctttaagg
421tgggaagcca gcttgaggtg ctggttcatg tgcaggattt tcaaagaaag cccaagaagt
481atggtggaga ctacctgcag gccagaattc actccctcaa gctgcaggct ggggctgtgg
541gcagggtggt ggattaccag aatgggtttt acaaggtttt ctttactttg ctatggccag
601gcaaagttaa agtatccgta tctctggtcc accccagtga agggatcaga gttcttcagc
661gcttacagga agataaacca gacagggtct atttcaagag tctcttccgt tcaggaagaa
721tttctgaaac tactgagtgc aacgtgtgtc ttcctgggaa tctgcccctg tgtaacttta
781cagacctcta cactggggag ccctggttct gcttcaaacc aaagaagctc ccttgcagca
841gcagaattac ccatttcaaa ggtggatacc tgaaaggtct cctaaccgct gcagagagtg
901ctttcttcca gagtggtgtc aatatcaaaa tgccagtcaa ctccagtgga cctgattggg
961taactgtgat tcccaggaga ataaaagaaa ctaacagtct agaactatct caaggctcag
1021gaacttttcc ttctgggtat tattataaag accagtggag gcccagaaag tttaagatgc
1081gtcagtttaa tgaccctgac aacattacag agtgcttaca aagaaaagtg gtgcatttat
1141ttggtgactc aacaatcagg caatggtttg aataccttac tacatttgtt ccagatttag
1201tggagtttaa cttgggtagt cccaagaatg tgggtccctt ccttgcagtg gaccagaagc
1261acaacatcct gctcaaatac cgctgccatg gtccacccat ccgcttcacg actgtcttta
1321gcaatgagct ccattatgtg gcgaatgagc tgaatggcat tgtgggaggg aagaacacag
1381tggttgccat agctgtatgg tctcacttca gcaccttccc tttggaagtg tacatccggc
1441ggcTCAGGAA CATCCGTCGA GCAGTGGTTC GGCTCCTCGA TCGAAGCCCA AAGACCGTGG
1501TGGTCATCCG GACGGCCAAC GCCCAAGAGC TGGGACCTGA GGTGAGCCTT TTCAACAGCG
1561ACTGGTACAA CTTTCAGCTG GACACCATCC TTCGGAGGAT GTTCTCAGGG GTTGGAGTAT
1621ATCTCGTCGA TGCCTGGGAG ATGACCCTGG CCCATTATCT ACCGCACAAG CTGCATCCAG
1681ATGAAGTTAT TGTGAAGAAC CAGCTGGACA TGTTCTTGTC CTTTGTGTGC CCCTTGGAAA
1741CCTACCCAAC TTTCTTGTAC AAAGTGGTTG ATATCGGTAA GCCTATCCCT AACCCTCTCC
1801TCGGTCTCGA TTCTACGTAG TAATGAACTA GTCCGTAACT TGAAAGTATT TCGATTTCTT
1861GGCTTTATAT ATCTTGTGGA AAGGACGAGT GGCCAGCGAC CTAGCGTTCG GTACGCGTTA
1921AGTCgacaat caacctctgg attacaaaat ttgtgaaaga tt

Download FASTA (ORF) (Full)