Construct: ORF TRCN0000476090

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF005253.1_s317c1
Derived from:
ccsbBroadEn_05507
DNA Barcode:
TCTAAAATAAGAAGAACCCTAGTG
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
LANCL3 (347404)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000476090
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 347404 LANCL3 LanC like 3 NM_198511.3 100% 100%
2 human 347404 LANCL3 LanC like 3 NM_001170331.2 91.2% 86% (many diffs)
3 human 347404 LANCL3 LanC like 3 XM_011543904.2 47.6% 41.8% (many diffs)
4 mouse 236285 Lancl3 LanC lantibiotic synthetase... NM_173414.3 81.1% 82% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1233
ORF length:
1164
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat ggacaccaag cgctgcttcg ccaatcgctt cgatgactac cagggcagcc
121tgctggcggg ccagtgtgag gaggcggtgg cgcccttggt caccgccacc atcgagcgca
181tcctccagga gcttccccca ctcgggggcg gcgcggaggc ccgaggggcg acggcggggg
241ctagcgcctg ccaggggggg ctttatggcg gcgtggccgg agtggcgtat atgctctacc
301acgtctcgca gagcccgctt ttcgccacgg cccgggaacg ctacctgcgc tcggctaagc
361gcctcatcga cgcgtgcgcc cgcgctgagg agtggggcga accggacgcc gacacccgcg
421ccgccttcct gctcgggggc gcgggcgtgt acgccgtggc cacgctcgta taccacgccc
481tgggccggtc cgactacgtg cagccgctgg gcaagttccg ggctctgtgt gccgtctgcg
541cgccggtctc cttcctggag tgcggctccg acgagctgtt cgtgggccgc gcgggttacc
601tgtgtgccgc gctggtgctc aagcagaaac tcgcccagga ggtgctgact ccagcacaga
661tcaagtcaat ttgtcaggca attctggact ctgggaagca gtatgccata aagaagagga
721aaccattccc cctgatgtat tcttactatg gaaccgaata cttgggggca gctcacggct
781tgtcgtctat tcttcagatg cttctttctt accatgagca tctcaagccc tcagatcggg
841aattggtatg gcagagcgtg gactttctca tggaacagga acaaaactgc aactggccac
901cTGAGCTCGG CGAGACCATC GAGAGAGAGA ATGAGCTGGT GCACTGGTGC CATGGCGCTC
961CAGGAATTGC CTATCTGTTT GCCAAAGCTT ATCTGGTTTC CAAGAAACCG CAGTACCTGG
1021ACACATGTAT TCGGTGTGGG GAACTCACAT GGCAGAAAGG CCTGCTAAAG AAGGGGCCTG
1081GGATTTGCCA TGGAGTAGCC GGCAGTGCCT ATGTCTTCCT GCTGCTGTAC CGGCTCACGG
1141GAAACTCTAA ATACATCTAC CGAGCTCAAA GTTCATTCCC TGTAAACTTG ATAAAGATGG
1201AACATCTGCT GTATACCAGA CAACATTGCT TTTTGCCAAC TTTCTTGTAC AAAGTGGTTG
1261ATATCGGTAA GCCTATCCCT AACCCTCTCC TCGGTCTCGA TTCTACGTAG TAATGAACTA
1321GTCCGTAACT TGAAAGTATT TCGATTTCTT GGCTTTATAT ATCTTGTGGA AAGGACGATC
1381TAAAATAAGA AGAACCCTAG TGACGCGTTA AGTCgacaat caacctctgg attacaaaat
1441ttgtgaaaga tt

Download FASTA (ORF) (Full)