Construct: ORF TRCN0000476105

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF006145.1_s317c1
Derived from:
ccsbBroadEn_02565
DNA Barcode:
GGGCCTCACCTTAGTTTAGCCCCG
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
RALBP1 (10928)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000476105
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 10928 RALBP1 ralA binding protein 1 NM_006788.4 100% 100%
2 mouse 19765 Ralbp1 ralA binding protein 1 NM_001198949.1 87.5% 91.7% (many diffs)
3 mouse 19765 Ralbp1 ralA binding protein 1 NM_009067.5 87.5% 91.7% (many diffs)
4 mouse 19765 Ralbp1 ralA binding protein 1 XM_006523915.3 81.4% 85% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2031
ORF length:
1965
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgac tgagtgcttc ctgcccccca ccagcagccc cagtgaacac cgcagggtgg
121agcatggcag cgggcttacc cggaccccca gctctgaaga gatcagccct actaagtttc
181ctggattgta ccgcactggc gagccctcac ctccccatga catcctccat gagcctcctg
241atgtagtgtc tgatgatgag aaagatcatg ggaagaaaaa agggaaattt aagaaaaagg
301aaaagaggac tgaaggctat gcagcctttc aggaagatag ctctggagat gaggcagaaa
361gtccttctaa aatgaagagg tccaagggaa tccatgtttt caagaagccc agcttttcta
421aaaagaagga aaaggatttt aaaataaaag agaaacccaa agaagaaaag cataaagaag
481aaaagcacaa agaagaaaaa cataaagaga agaagtcaaa agacttgaca gcagctgatg
541ttgttaaaca gtggaaggaa aagaagaaaa agaaaaagcc aattcaggag ccagaggtgc
601ctcagattga tgttccaaat ctcaaaccca tttttggaat tcctttggct gatgcagtag
661agaggaccat gatgtatgat ggcattcggc tgccagccgt tttccgtgaa tgtatagatt
721acgtagagaa gtatggcatg aagtgtgaag gcatctacag agtatcagga attaaatcaa
781aggtggatga gctaaaagca gcctatgacc gggaggagtc tacaaacttg gaagactatg
841agcctaacac tgtagccagt ttgctgaagc agtatttgcg agaccttcca gagaatttgc
901ttaccaaaga gcttatgccc agatttgaag aggcttgtgg gaggaccacg gagactgaga
961aagtgcagga attccagcgt ttactcaaag aactgccaga atgtaactat cttctgattt
1021cttggctcat tgtgcacatg gaccatgtca ttgcaaagga actggaaaca aaaatgaata
1081tacagaacat ttctatagtg ctcagcccaa ctgtgcagat cagcaatcga gtcctgtatg
1141tgtttttcac acatgtgcaa gaactctttg gaaatgtggt actaaagcaa gtgatgaaac
1201ctctgcgatg gtctaacatg gccacgatgc ccacgctgcc agagacccag gcgggcatca
1261aggaggagat caggagacag gagtttcttt tgaattgttt acatcgagat ctgcagggtg
1321ggataaagga tttgtctaaa gaagaaagat tatgggaagt acaaagaatt ttgacagccc
1381tcaaaagaaa actgagagaa gctaaaagac aggagtgtga aaccaagatt gcacaagaga
1441tagccagtct ttcaaaagag gatgtttcca aagaagagat gaatgaaaat gaagaagtta
1501taaatattct ccttgctcag gagaatgaga tcctgactga acaggaggag ctcctggcca
1561tggagcagtt tctgcgccgg cagattgcct cagaaaaaga agagattgaa cgcctcagag
1621ctgagattgc tgaaattcag agtcgccagc agcacggccg aagtgagact gaggagtact
1681ccTCCGAGAG CGAGAGCGAG AGTGAGGATG AGGAGGAGCT GCAGATCATT CTGGAAGACT
1741TACAGAGACA GAACGAAGAG CTGGAAATAA AGAACAATCA TTTGAATCAA GCAATTCATG
1801AGGAGCGCGA GGCCATCATC GAGCTGCGCG TGCAGCTGCG GCTGCTCCAG ATGCAGCGAG
1861CCAAGGCCGA GCAGCAGGCG CAGGAGGACG AGGAGCCTGA GTGGCGCGGG GGTGCCGTCC
1921AGCCGCCCAG AGACGGCGTC CTTGAGCCAA AAGCAGCTAA AGAGCAGCCA AAGGCAGGCA
1981AGGAGCCGGC AAAGCCATCG CCCAGCAGGG ATAGGAAGGA GACGTCCATC TGCCCAACTT
2041TCTTGTACAA AGTGGTTGAT ATCGGTAAGC CTATCCCTAA CCCTCTCCTC GGTCTCGATT
2101CTACGTAGTA ATGAACTAGT CCGTAACTTG AAAGTATTTC GATTTCTTGG CTTTATATAT
2161CTTGTGGAAA GGACGAGGGC CTCACCTTAG TTTAGCCCCG ACGCGTTAAG TCgacaatca
2221acctctggat tacaaaattt gtgaaagatt

Download FASTA (ORF) (Full)