Construct: ORF TRCN0000476363

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF011863.1_s317c1
Derived from:
ccsbBroadEn_09860
DNA Barcode:
TTCCGTTAGGACTGTCTCCACGAC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
RNF152 (220441)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000476363
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 220441 RNF152 ring finger protein 152 NM_173557.3 99.8% 100% 180G>T
2 human 220441 RNF152 ring finger protein 152 XM_005266650.3 99.8% 100% 180G>T
3 human 220441 RNF152 ring finger protein 152 XM_005266652.3 99.8% 100% 180G>T
4 human 220441 RNF152 ring finger protein 152 XM_011525878.2 99.8% 100% 180G>T
5 human 220441 RNF152 ring finger protein 152 XM_011525879.2 99.8% 100% 180G>T
6 human 220441 RNF152 ring finger protein 152 XM_017025612.1 99.8% 100% 180G>T
7 human 220441 RNF152 ring finger protein 152 XM_017025613.1 99.8% 100% 180G>T
8 mouse 320311 Rnf152 ring finger protein 152 NM_001160368.1 88% 97.5% (many diffs)
9 mouse 320311 Rnf152 ring finger protein 152 NM_178779.4 88% 97.5% (many diffs)
10 mouse 320311 Rnf152 ring finger protein 152 XM_006529699.3 88% 97.5% (many diffs)
11 mouse 320311 Rnf152 ring finger protein 152 XM_017321207.1 88% 97.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
678
ORF length:
609
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat ggagacgctg tcccaggact ctctgctgga atgtcagatc tgtttcaatt
121actacagccc ccggcgcagg cccaagttgc tggactgcaa gcacacctgc tgttcagtgt
181gcctgcagca gatgaggacc agccagaagg atgtgcggtg cccctggtgc cgcggtgtca
241ccaagcttcc tcccggcttc tccgtgtcgc agctcccgga cgacccggag gtcctggctg
301tcatcgccat tccacacact tccgaacaca ccccggtctt catcaaactt cccagcaatg
361ggtgctacat gctgcccctg cccatctcca aggagcgtgc gctgctgccc ggagacatgg
421gctgccgcct gctgcccggg agccagcaga agtccgtcac cgtggtgacc atccctgctg
481aacagcagcc tctgcaaggt ggggctcccc aggaggcggt ggaggaggag caggacaggc
541ggggcgtggt gaaaagctcc acctggtcGG GGGTGTGCAC TGTCATCTTG GTGGCTTGCG
601TCTTGGTCTT CCTCCTCGGC ATCGTGCTTC ACAACATGTC TTGCATTTCT AAGCGCTTCA
661CTGTGATATC CTGTGGCTTG CCAACTTTCT TGTACAAAGT GGTTGATATC GGTAAGCCTA
721TCCCTAACCC TCTCCTCGGT CTCGATTCTA CGTAGTAATG AACTAGTCCG TAACTTGAAA
781GTATTTCGAT TTCTTGGCTT TATATATCTT GTGGAAAGGA CGATTCCGTT AGGACTGTCT
841CCACGACACG CGTTAAGTCg acaatcaacc tctggattac aaaatttgtg aaagatt

Download FASTA (ORF) (Full)