Construct: ORF TRCN0000476791

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF002466.1_s317c1
Derived from:
ccsbBroadEn_12983
DNA Barcode:
TCAAGGTCCTGTTAACATTCCCGA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
HNRNPLL (92906)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000476791
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 92906 HNRNPLL heterogeneous nuclear ribon... NM_001142650.1 50.8% 49.1% (many diffs)
2 human 92906 HNRNPLL heterogeneous nuclear ribon... NM_138394.4 50.2% 48.1% (many diffs)
3 human 92906 HNRNPLL heterogeneous nuclear ribon... XM_011533166.3 47.7% 45.7% (many diffs)
4 human 92906 HNRNPLL heterogeneous nuclear ribon... XM_011533165.3 47.3% 46.2% (many diffs)
5 human 92906 HNRNPLL heterogeneous nuclear ribon... XM_005264640.3 46.2% 44.7% (many diffs)
6 human 92906 HNRNPLL heterogeneous nuclear ribon... XM_005264639.4 45.7% 43.8% (many diffs)
7 mouse 72692 Hnrnpll heterogeneous nuclear ribon... NM_144802.4 42.4% 41.9% (many diffs)
8 mouse 72692 Hnrnpll heterogeneous nuclear ribon... XR_001782118.1 22.3% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
891
ORF length:
825
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgtt ggctcgggag acgtacgagg aggaccggga gtacgagagc caggccaagc
121gtctcaagac cgaggagggg gagatcgact actcggccga ggaaggcgag aaccgccggg
181aagcgacgcc ccggggcggg ggcgatggcg gcggcggcgg ccggagcttc tctcagccgg
241aggcaggtgg aagtcatcat aaagtttctg tttcacccgt cgtccatgtt cgaggactct
301gtgaatctgt ggtggaagca gacctcgtgg aagcgctgga aaaatttggg acaatatgct
361atgtgatgat gatgccattt aaacgacagg ctctagtgga atttgaaaac atagatagtg
421ccaaagaatg tgtgacattt gctgcagatg aacccgtgta cattgctggt caacaggctt
481ttttcaacta ttctacaagc aaaaggatca cTCGGCCAGG AAATACTGAT GATCCATCAG
541GAGGCAACAA AGTTCTTCTG CTCTCAATTC AGAATCCGCT TTATCCAATT ACAGTGGATG
601TTTTATATAC TGTATGCAAC CCTGTTGGCA AAGTGCAACG TATTGTTATA TTCAAGAGAA
661ATGGGATACA AGCAATGGTT GAGTTTGAAT CAGTCCTTTG TGCCCAGAAA GCTAAAGCAG
721CACTCAATGG AGCTGATATA TATGCTGGAT GTTGCACACT AAAAATTGAA TATGCACGGC
781CAACTCGTCT AAATGTTATT AGGAATGACA ATGACAGTTG GGACTACACT AAACCATATT
841TGGGAAGACG AGGTAGGTAT TTTATACATT TTAGAATGTA CTTGATCTGC TGCCCAACTT
901TCTTGTACAA AGTGGTTGAT ATCGGTAAGC CTATCCCTAA CCCTCTCCTC GGTCTCGATT
961CTACGTAGTA ATGAACTAGT CCGTAACTTG AAAGTATTTC GATTTCTTGG CTTTATATAT
1021CTTGTGGAAA GGACGATCAA GGTCCTGTTA ACATTCCCGA ACGCGTTAAG TCgacaatca
1081acctctggat tacaaaattt gtgaaagatt

Download FASTA (ORF) (Full)