Construct: ORF TRCN0000476924

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF017471.1_s317c1
Derived from:
ccsbBroadEn_10594
DNA Barcode:
CGGTCGGATAGCCTTCGCACGAAA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
LINC00346 (283487)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000476924
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 283487 LINC00346 long intergenic non-protein... NR_027701.1 7.7% 1_518del;1011_6322del
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
561
ORF length:
492
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat gaggcctcag ccaagaggag gttcgggaag aaaggaaaac acaggtgagg
121agagagaagg gcgggcagag aggtaccacg ccattagtgc tgatggggag aggcggctcc
181agcccggcac tgctgtccTT ACGAGGCATG TTTCCTTTTT ATTCGGAGGA AGAGAAGCAG
241AGGAACACGT CATGGAGACG GACCGAGTTG AAGGAGCCAG GGATGGTGAC AAGCGGAAGG
301AAGTGTGTTT TGTCCCCATC CAGGGAAGCT TTTGTTTCAT GAGACTTACT TGCGCACGTC
361TGGTAGCTGC CCTGGACATT CATGGACTTT CGTTTTCACT CAGATTTTGT GGTTCACGTG
421ACACAAAGCA TGAGGACATC ACTGGGCGAG AGGGCCAGGT CACCCCACTG CCGAGGGGCA
481CGCCCCAGCT GTGCACCGCT AGAGTGGGCT TGTCCAGTCC TCGGACACGG GGACAGGGTG
541TGCCCATCTC ATGTAAGACA TTGCCAACTT TCTTGTACAA AGTGGTTGAT ATCGGTAAGC
601CTATCCCTAA CCCTCTCCTC GGTCTCGATT CTACGTAGTA ATGAACTAGT CCGTAACTTG
661AAAGTATTTC GATTTCTTGG CTTTATATAT CTTGTGGAAA GGACGACGGT CGGATAGCCT
721TCGCACGAAA ACGCGTTAAG TCgacaatca acctctggat tacaaaattt gtgaaagatt

Download FASTA (ORF) (Full)