Construct: ORF TRCN0000477029

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF006073.1_s317c1
Derived from:
ccsbBroadEn_02799
DNA Barcode:
ATCTGGTGCATGCCCCGTTTCTTC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
DDAH1 (23576)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000477029
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 23576 DDAH1 dimethylarginine dimethylam... NM_012137.4 100% 100%
2 human 23576 DDAH1 dimethylarginine dimethylam... XM_017000889.1 66.9% 63% (many diffs)
3 human 23576 DDAH1 dimethylarginine dimethylam... NM_001330655.2 64.7% 64.5% 0_1ins301;2delT
4 human 23576 DDAH1 dimethylarginine dimethylam... XM_011541158.1 64.7% 64.5% 0_1ins301;2delT
5 human 23576 DDAH1 dimethylarginine dimethylam... XM_005270707.2 64.5% 64.5% (many diffs)
6 human 23576 DDAH1 dimethylarginine dimethylam... NM_001134445.2 63.8% 63.8% 0_1ins309
7 human 23576 DDAH1 dimethylarginine dimethylam... XM_005270710.2 63.8% 63.8% 0_1ins309
8 human 23576 DDAH1 dimethylarginine dimethylam... XM_024446130.1 63.8% 63.8% 0_1ins309
9 mouse 69219 Ddah1 dimethylarginine dimethylam... NM_026993.3 89.2% 93.6% (many diffs)
10 mouse 69219 Ddah1 dimethylarginine dimethylam... XM_017319712.1 61.3% 59.9% (many diffs)
11 mouse 69219 Ddah1 dimethylarginine dimethylam... XM_011240221.2 56.7% 61% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
921
ORF length:
855
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatggc cgggctcggc caccccgccg ccttcggccg ggccacccac gccgtggtgc
121gggcgctacc cgagtcgctc ggccagcacg cgctgagaag cgccaagggc gaggaggtgg
181acgtcgcccg cgcggaacgg cagcaccagc tctacgtggg cgtgctgggc agcaagctgg
241ggctgcaggt ggtggagctg ccggccgacg agagccttcc ggactgcgtc ttcgtggagg
301acgtggccgt ggtgtgcgag gagacggccc tcatcacccg acccggggcg ccgagccgga
361ggaaggaggt tgacatgatg aaagaagcat tagaaaaact tcagctcaat atagtagaga
421tgaaagatga aaatgcaact ttagatggcg gagatgtttt attcacaggc agagaatttt
481ttgtgggcct ttccaaaagg acaaatcaac gaggtgctga aatcttggct gatactttta
541agGACTATGC AGTCTCCACA GTGCCAGTGG CAGATGGGTT GCATTTGAAG AGTTTCTGCA
601GCATGGCTGG GCCTAACCTG ATCGCAATTG GGTCTAGTGA ATCTGCACAG AAGGCCCTTA
661AGATCATGCA ACAGATGAGT GACCACCGCT ACGACAAACT CACTGTGCCT GATGACATAG
721CAGCAAACTG TATATATCTA AATATCCCCA ACAAAGGGCA CGTCTTGCTG CACCGAACCC
781CGGAAGAGTA TCCAGAAAGT GCAAAGGTTT ATGAGAAACT GAAGGACCAT ATGCTGATCC
841CCGTGAGCAT GTCTGAACTG GAAAAGGTGG ATGGGCTGCT CACCTGCTGC TCAGTTTTAA
901TTAACAAGAA AGTAGACTCC TGCCCAACTT TCTTGTACAA AGTGGTTGAT ATCGGTAAGC
961CTATCCCTAA CCCTCTCCTC GGTCTCGATT CTACGTAGTA ATGAACTAGT CCGTAACTTG
1021AAAGTATTTC GATTTCTTGG CTTTATATAT CTTGTGGAAA GGACGAATCT GGTGCATGCC
1081CCGTTTCTTC ACGCGTTAAG TCgacaatca acctctggat tacaaaattt gtgaaagatt

Download FASTA (ORF) (Full)