Construct: ORF TRCN0000477660

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014324.1_s317c1
Derived from:
ccsbBroadEn_13053
DNA Barcode:
GATAGCAACATACCAAAAAGTTCT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TTC6 (319089)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000477660
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 319089 TTC6 tetratricopeptide repeat do... NM_001368142.1 64.5% 61.7% (many diffs)
2 human 319089 TTC6 tetratricopeptide repeat do... XM_011537431.2 37.8% 36.3% (many diffs)
3 human 319089 TTC6 tetratricopeptide repeat do... XM_011537430.2 35% 33.7% (many diffs)
4 human 319089 TTC6 tetratricopeptide repeat do... XM_017021256.1 31.8% 30.5% (many diffs)
5 human 319089 TTC6 tetratricopeptide repeat do... NM_001310135.2 26.4% 25.4% (many diffs)
6 human 319089 TTC6 tetratricopeptide repeat do... XM_024449560.1 26.3% 25.2% (many diffs)
7 human 319089 TTC6 tetratricopeptide repeat do... XM_017021254.1 23.8% 22.7% (many diffs)
8 human 319089 TTC6 tetratricopeptide repeat do... XR_943762.2 23.1% 1_4763del;4856C>T;6372_6951del
9 human 319089 TTC6 tetratricopeptide repeat do... XM_017021255.1 21.5% 20.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1677
ORF length:
1608
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat ggacaaaggt ctcagtgagt tgagtcctat gcagcaagcc cttatttatt
121cattttgtga aaaccatgac aaggccattg aggtcttgga tggaatcagc tggaatagag
181ctgagatgac catgtgtgct ctattagcaa aagttcaaat gaaggccaag agaaccaagg
241aagctgtgga agtgcttaag aaggctttgg atgccatttc tcattctgat aaaggaccag
301atgccacagc aatttcagca gactgtctgt ataacttggg tctttgttac atggaggaag
361gcaatttaca aatggctttt gattctttta caaaagctgt gaaagcaaat ccagattttg
421cagaaagctt ttatcagcga gggctttgta aagtgaaact ccacaaggat agctcgattc
481tggattttaa tcgtgcaatt accctcaatc caaaacatta ccaggcatat ttaagccgag
541tagcattcta tggtttaaaa ggcaggtatt ccaaagcaat cttgaattgt aacaaggcta
601ttaaaattta ccctgaaagc gtacgtgcct atctctacag aggagttctg aaatactaca
661acaagactta taagctagca attacagatt taactacagc tatcagcatg gacaaaaata
721gttatacagc attttataac agagcattat gttacaccaa gataagggaa cttcaaatgg
781cattaacaga ttatggaatt gtgctgcttc ttgatgctac agaaactgta aaactaaata
841ccttccttaa tcgtggactc atctacgtag aactaggcca gtatggcttt gcactagagg
901attttaaaca agctgcactg ataagccgga ctaacgggag cctttgtcac gccactgcca
961tgtgccatca cagaattaat gagtttgaag aagctgtcaa tttctttact tgggctctta
1021aaattaaccc atgttttctg gatgcttatg ttggacgggg aaattcttac atggaatacg
1081gtcatgatga agccaccaag caagcacaga aagactttct gaaagcactg catattaatc
1141cagcatacat aaaagccaga attagttttg gctataattt gcaggcccaa ggaaaattcc
1201agaaagcttg gaaccacttt accattgcca tagatactga tccaaagaac tacctagcct
1261atgaaggaag agctgtggtc tgtcttcaga tgggtaataa ttttGCTGCA ATGCAGGATA
1321TTAATGCTGC CATGAAGATC AGTACTACAG CAGAATTCTT AACAAATCGT GGGGTGATTC
1381ATGAGTTTAT GGGCCACAAA CAGAATGCAA TGAAAGACTA CCAAGATGCA ATTACTCTAA
1441ACCCCAAGTA CTCGCTGGCT TACTTTAATG CAGGAAATAT CTACTTTCAC CACAGGCAGT
1501TTTCCCAGGA AGAAAGTCTT GGCCTGGCTT GGAGTCTTTC CCTTGACTCA TTTCTGAGAA
1561CTGGGGGTGC AACCTTCTCT TCAGGAGTGA ATCCTCTTCA AACTCTTCAC AGAAGGATGT
1621CAATTCTGTC CCCCCTCCCC CCAACCTGTC CCAGGGATGA GATGGATTTT ACATCTTTGC
1681CAACTTTCTT GTACAAAGTG GTTGATATCG GTAAGCCTAT CCCTAACCCT CTCCTCGGTC
1741TCGATTCTAC GTAGTAATGA ACTAGTCCGT AACTTGAAAG TATTTCGATT TCTTGGCTTT
1801ATATATCTTG TGGAAAGGAC GAGATAGCAA CATACCAAAA AGTTCTACGC GTTAAGTCga
1861caatcaacct ctggattaca aaatttgtga aagatt

Download FASTA (ORF) (Full)

GPP Web Portal Terms of Service

Effective Date: December 8, 2025
By using this site, you agree to our terms and conditions below.

Overview of Terms

The data made available on this website were generated for research purposes and are not intended for clinical or commercial uses. Commercial use (or other use for profit-making purposes) of the GPP Web Portal and its tools, is not permitted under these terms and may require a separate license agreement from Broad or its contributors. For more information, please contact partnering@broadinstitute.org.

The original data may be subject to rights claimed by third parties, including but not limited to, patent, copyright, other intellectual property rights, biodiversity-related access and benefit-sharing rights. It is the responsibility of users of Broad Institute services to ensure that their use of the data does not infringe any of the rights of such third parties.

Any questions or comments concerning these Terms of Use can be addressed to: legal@broadinstitute.org.

By accessing and viewing this GPP Web Portal, you agree to the following terms and conditions:

Attribution

You agree to acknowledge the Broad Institute (e.g., in publications, services or products) for any of your use of its online services, databases or software in accordance with good scientific practice. You agree to use the acknowledgment wording provided for the relevant tools as indicated on the FAQ for each tool.

Updating the Terms of Use

We reserve the right to update these Terms of Use at any time. When alterations are inevitable, we will attempt to give reasonable notice of any changes by placing a notice on our website, but you may wish to check each time you use the website. The date of the most recent revision will appear on this, the "GPP Web Portal Terms of Use" page. If you do not agree to these changes, please do not continue to use our online services. We will also make available an archived copy of the previous Terms of Use for comparison.

Indemnification and Disclaimer of Warranties

You are using this GPP Web Portal at your own risk, and you hereby agree to hold Broad and its contributors and their trustees, directors, officers, employees, and affiliated investigators harmless for any third party claims which may arise from your use of the GPP Web Portal, the tools available therein, or any portion thereof. Further, you agree to indemnify Broad, its contributors, and its and their trustees, directors, officers, employees, affiliated investigators, students, and affiliates for any loss, costs, claims, damages, or other liabilities arising from any unpermitted commercial or profit-making use you make of the GPP Web Portal. The GPP Web Portal is a research tool and is provided "as is". Broad does not represent that the GPP Web Portal is free of errors or bugs or suitable for any particular tasks.

ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS ARE DISCLAIMED. IN NO EVENT SHALL BROAD OR ITS CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THE GPP WEB PORTAL, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Governing Law

The terms and conditions herein shall be construed, governed, interpreted, and applied in accordance with the internal laws of the Commonwealth of Massachusetts, U.S.A. Furthermore, by accessing, downloading, or using the Database, You consent to the personal jurisdiction of, and venue in, the state and federal courts within Massachusetts with respect to Your download or use of the Database.