Construct: ORF TRCN0000477915

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF003186.1_s317c1
Derived from:
ccsbBroadEn_05611
DNA Barcode:
AATTGTGAGTTCGGCTCTCGCGTA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
OR4D10 (390197)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000477915
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 390197 OR4D10 olfactory receptor family 4... NM_001004705.1 100% 100%
2 mouse 258155 Olfr1425 olfactory receptor 1425 NM_001011853.1 85% 85.6% (many diffs)
3 mouse 258805 Olfr1426 olfactory receptor 1426 NM_146809.2 83.8% 84.6% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1002
ORF length:
933
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat ggagatggaa aactgcacca gggtaaaaga atttattttc cttggcctga
121cccagaatcg ggaagtgagc ttagtcttat ttcttttcct actcttggtg tatgtgacaa
181ctttgctggg aaacctcctc atcatggtca ctgttacctg tgaatctcgc cttcacacgc
241ccatgtattt tttgctccat aatttatcta ttgccgatat ctgcttctct tccatcacag
301tgcccaaggt tctggtggac cttctgtctg aaagaaagac catctccttc aatcattgct
361tcactcagat gtttctattc caccttattg gaggggtgga tgtattttct ctttcggtga
421tggcattgga tcgatatgtg gccatctcca agcccctgca ctatgcgact atcatgagta
481gagaccattg cattgggctc acagtggctg cctggttggg gggctttgtc cactccatcg
541tgcagatttc cctgttgctc ccactccctt tctgcggacc caatgttctt gacactttct
601actgtgatgt ccaccgggtc ctcaaactgg cccatacaga cattttcata cttgaactac
661TAATGATTTC CAACAATGGA CTGCTCACCA CACTGTGGTT TTTCCTGCTC CTGGTGTCCT
721ACATAGTCAT ATTATCATTA CCCAAGTCTC AGGCAGGAGA GGGCAGGAGG AAAGCCATCT
781CCACCTGCAC CTCCCACATC ACTGTGGTGA CCCTGCATTT CGTGCCCTGC ATCTATGTCT
841ATGCCCGGCC CTTCACTGCC CTCCCCATGG ATAAGGCCAT CTCTGTCACC TTCACTGTCA
901TCTCCCCTCT GCTCAACCCC TTGATCTACA CTCTGAGGAA CCATGAGATG AAGTCAGCCA
961TGAGGAGACT GAAGAGAAGA CTTGTGCCTT CTGATAGAAA ATTGCCAACT TTCTTGTACA
1021AAGTGGTTGA TATCGGTAAG CCTATCCCTA ACCCTCTCCT CGGTCTCGAT TCTACGTAGT
1081AATGAACTAG TCCGTAACTT GAAAGTATTT CGATTTCTTG GCTTTATATA TCTTGTGGAA
1141AGGACGAAAT TGTGAGTTCG GCTCTCGCGT AACGCGTTAA GTCgacaatc aacctctgga
1201ttacaaaatt tgtgaaagat t

Download FASTA (ORF) (Full)