Construct: ORF TRCN0000478060

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF010698.1_s317c1
Derived from:
ccsbBroadEn_10641
DNA Barcode:
GCGACCCTATGTTCGGTCACCTCG
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
BAIAP2-DT (440465)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000478060
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 440465 BAIAP2-DT BAIAP2 divergent transcript NR_026857.1 12.4% 1_2081del;2634_4421del
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
621
ORF length:
552
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat gcctgtcaag ggagcttcct ctctcctctt cctccccctc ccaccttctg
121cctggcagct ttgccttctc tccaagagaa gggtccaccc aatcagaact cctcttcctt
181ttcattcctg gattaaagca cttgtaaTCA GTAACCAGAA AGTTCCAGAG CGGGAGAGAC
241CGGAAGGCAC TGGAGTGCTA TCGGACGGGT GTCTGGGGCA GAGCCAGGAG GGCGAGCCTC
301TTCTCTCCCC GCCTGCCCTT GCTCACTTCC CCCTCCATGC CAGGTGCTGT GGGAGCAGCT
361GGGCCTGGCC GGGGTCGGCG GGTGAAGCTA TCCGCATGGT GTCTGGAGCA CCGTTTCTTT
421GCTTCCTGGA TGGGCTGGAT GGGCTCCCGT GTTCTTCACC AATGGCAGCG TTACCAGCAC
481CAATGGCAGC GTTACCAGCA AGAAGGCAAA GGCAGGAGCA CATCGAGGGT GGGAGCCAGG
541GCTGTGGGGT CAGGAGTCCC GCTCCTTGCC GCGGGAAGCC TGGCTCAGCC ACCTCCAGCA
601CACTTCGGCT TTGTCCAGCA TTGCCAACTT TCTTGTACAA AGTGGTTGAT ATCGGTAAGC
661CTATCCCTAA CCCTCTCCTC GGTCTCGATT CTACGTAGTA ATGAACTAGT CCGTAACTTG
721AAAGTATTTC GATTTCTTGG CTTTATATAT CTTGTGGAAA GGACGAGCGA CCCTATGTTC
781GGTCACCTCG ACGCGTTAAG TCgacaatca acctctggat tacaaaattt gtgaaagatt

Download FASTA (ORF) (Full)