Construct: ORF TRCN0000478373

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF006785.1_s317c1
Derived from:
ccsbBroadEn_13349
DNA Barcode:
TACCCGACCCATGCGGACCGACCC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
DACT2 (168002)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000478373
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 168002 DACT2 dishevelled binding antagon... NM_001286350.2 60.5% 60.5% 1_714del
2 human 168002 DACT2 dishevelled binding antagon... XM_011535507.2 56.8% 56.8% 1_834del
3 human 168002 DACT2 dishevelled binding antagon... NR_104425.2 54.7% 1_377del;1476_2006del
4 human 168002 DACT2 dishevelled binding antagon... NM_214462.5 47.2% 47.2% 1_1224del
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1167
ORF length:
1098
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat gccccttgag ggtccccagc agtctggcag ccttccagag gagggctcca
121agccctcaaa cagctgtgtc ctcagggaga ccatggtgca ggcttctccc agctcaaagg
181cccagcagac accctcagct caggactatg gacgaggcaa catcatatcc ccatccagga
241tgctggacaa gagcccctca ccggcctctg ggcactttgc ccacccatcc tttgctgcca
301gcctgaaaat gggtcccccc aagagcaagg ctgaaaaaat caagagaagt cccatggaca
361aggtgctgag gtttgcaagg cagccgctgc ttctactgga caggcctgag ggagcccatg
421cagcccccca gccatccctg gagtgggacc ctgcccactg gcccacaggg aggggcgggc
481tccagcggag gccagccctg gcctgggagg cacccgggcg ctcctgttct gagtccaccc
541tctaccccat gcctgtcctc gtccccttgg cagtggcccc gcaggagagc caccggacct
601cagcccaagc cctgttcccc tttgaggcgt cactgctcac ctcagtggcc aggaggaagc
661atcgccgctg gcagtccacc gtggagatct cggcccgggc ccgcctggcc agctgtcctg
721agtctaacct ggggcccccc aggcccgtgg ccaggagagc aggtggccca ctggcccggg
781gccgtccctc actggtccgc caggacgcct acaccaggag cgactcagag ccctccaagc
841acTCGGCCGA GTGTGACCCG CGGTTCCCGT CAGTCATCCC GGAGACCAGC GAGGGAGAGT
901CCAGTGACCA CACCACCAAC CGATTCGGAG ACCGTGAGTC CAGCAGCAGC GACGAGGAGG
961GCGGCGCCCA GAGCAGGGAC TGTGACCTGG CACTGGGCTA TGTGGCGGCC GGGCATGCGG
1021AGCTGGCCTG GACCCAGGAG GCCCCGGTCA GCTCGGGGCC ACTCCTGTCC CCCGTGCCCA
1081AGCTGTGCCG TATTAAGGCC TCCAAGGCCC TGAAGAAGAA GATCCGCAGG TTCCAGCCGA
1141CGGCCCTGAA GGTCATGACC ATGGTGTTGC CAACTTTCTT GTACAAAGTG GTTGATATCG
1201GTAAGCCTAT CCCTAACCCT CTCCTCGGTC TCGATTCTAC GTAGTAATGA ACTAGTCCGT
1261AACTTGAAAG TATTTCGATT TCTTGGCTTT ATATATCTTG TGGAAAGGAC GATACCCGAC
1321CCATGCGGAC CGACCCACGC GTTAAGTCga caatcaacct ctggattaca aaatttgtga
1381aagatt

Download FASTA (ORF) (Full)