Construct: ORF TRCN0000478767

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF018009.1_s317c1
Derived from:
ccsbBroadEn_00118
DNA Barcode:
CGTGACGAGGATAACACTACGGGA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ATIC (471)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000478767
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 471 ATIC 5-aminoimidazole-4-carboxam... NM_004044.7 100% 100%
2 human 471 ATIC 5-aminoimidazole-4-carboxam... XM_017004187.2 93.6% 93.4% (many diffs)
3 human 471 ATIC 5-aminoimidazole-4-carboxam... XM_024452919.1 90% 90% 0_1ins177
4 mouse 108147 Atic 5-aminoimidazole-4-carboxam... NM_026195.3 85.7% 91% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1842
ORF length:
1776
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatggc tcccggccag ctcgccttat ttagtgtctc tgacaaaacc ggccttgtgg
121aatttgcaag aaacctgacc gctcttggtt tgaatctggt cgcttccgga gggactgcaa
181aagctctcag ggatgctggt ctggcagtca gagatgtctc tgagttgacg ggatttcctg
241aaatgttggg gggacgtgtg aaaactttgc atcctgcagt ccatgctgga atcctagctc
301gtaatattcc agaagataat gctgacatgg ccagacttga tttcaatctt ataagagttg
361ttgcctgcaa tctctatccc tttgtaaaga cagtggcttc tccaggtgta actgttgagg
421aggctgtgga gcaaattgac attggtggag taaccttact gagagctgca gccaaaaacc
481acgctcgagt gacagtggtg tgtgaaccag aggactatgt ggtggtgtcc acggagatgc
541agagctccga gagtaaggac acctccttgg agactagacg ccagttagcc ttgaaggcat
601tcactcatac ggcacaatat gatgaagcaa tttcagatta tttcaggaaa cagtacagca
661aaggcgtatc tcagatgccc ttgagatatg gaatgaaccc acatcagacc cctgcccagc
721tgtacacact gcagcccaag cttcccatca cagttctaaa tggagcccct ggatttataa
781acttgtgcga tgctttgaac gcctggcagc tggtgaagga actcaaggag gctttaggta
841ttccagccgc tgcctctttc aaacatgtca gcccagcagg tgctgctgtt ggaattccac
901tcagtgaaga tgaggccaaa gtctgcatgg tttatgatct ctataaaacc ctcacaccca
961tctcagcggc atatgcaaga gcaagagggg ctgataggat gtcttcattt ggtgattttg
1021ttgcattgtc cgatgtttgt gatgtaccaa ctgcaaaaat tatttccaga gaagtatctg
1081atggtataat tgccccagga tatgaagaag aagccttgac aatactttcc aaaaagaaaa
1141atggaaacta ttgtgtcctt cagatggacc aatcttacaa accagatgaa aatgaagttc
1201gaactctctt tggtcttcat ttaagccaga agagaaataa tggtgtcgtc gacaagtcat
1261tatttagcaa tgttgttacc aaaaataaag atttgccaga gtctgccctc cgagacctca
1321tcgtagccac cattgctgtc aagtacactc agtctaactc tgtgtgctac gccaagaacg
1381ggcaggttat cggCATTGGA GCAGGACAGC AGTCTCGTAT ACACTGCACT CGCCTTGCAG
1441GAGATAAGGC AAACTATTGG TGGCTTAGAC ACCATCCACA AGTGCTTTCG ATGAAGTTTA
1501AAACAGGAGT GAAGAGAGCA GAAATCTCCA ATGCCATCGA TCAATATGTG ACTGGAACCA
1561TTGGCGAGGA TGAAGATTTG ATAAAGTGGA AGGCACTGTT TGAGGAAGTC CCTGAGTTAC
1621TCACTGAGGC AGAGAAGAAG GAATGGGTTG AGAAACTGAC TGAAGTTTCT ATCAGCTCTG
1681ATGCCTTCTT CCCTTTCCGA GATAACGTAG ACAGAGCTAA AAGGAGTGGT GTGGCGTACA
1741TTGCGGCTCC CTCCGGTTCT GCTGCTGACA AAGTTGTGAT TGAGGCCTGC GACGAACTGG
1801GAATCATCCT CGCTCATACG AACCTTCGGC TCTTCCACCA CTGCCCAACT TTCTTGTACA
1861AAGTGGTTGA TATCGGTAAG CCTATCCCTA ACCCTCTCCT CGGTCTCGAT TCTACGTAGT
1921AATGAACTAG TCCGTAACTT GAAAGTATTT CGATTTCTTG GCTTTATATA TCTTGTGGAA
1981AGGACGACGT GACGAGGATA ACACTACGGG AACGCGTTAA GTCgacaatc aacctctgga
2041ttacaaaatt tgtgaaagat t

Download FASTA (ORF) (Full)