Construct: ORF TRCN0000478813

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF006713.1_s317c1
Derived from:
ccsbBroadEn_12517
DNA Barcode:
TAATAATCCCCTCTGATATATGAC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
UBE2Z (65264)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000478813
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 65264 UBE2Z ubiquitin conjugating enzym... NM_023079.5 69.3% 69.4% 1_324del;846C>T
2 mouse 268470 Ube2z ubiquitin-conjugating enzym... NM_172300.3 65.5% 69.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
804
ORF length:
738
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgtc catttataag gagcctcctc caggaatgtt cgttgtacct gatactgttg
121acatgactaa gattcatgca ttgatcacag gcccatttga cactccttat gaagggggtt
181tcttcctgtt cgtgtttcgg tgtccgcccg actatcccat ccacccacct cgggtcaaac
241tgatgacaac gggcaataac acagtgaggt ttaaccccaa cttctaccgc aatgggaaag
301tctgcttgag tattctaggt acatggactg gacctgcctg gagcccagcc cagagcatct
361cctcagtgct catctctatc cagtccctga tgactgagaa cccctatcac aatgagcccg
421gctttGAACA GGAGAGACAT CCAGGAGACA GCAAAAACTA TAATGAATGT ATCCGGCACG
481AGACCATCAG AGTTGCAGTC TGTGACATGA TGGAAGGAAA GTGTCCCTGT CCTGAACCCC
541TACGAGGGGT GATGGAGAAG TCCTTTCTGG AGTATTACGA CTTCTATGAG GTGGCCTGCA
601AAGATCGCCT GCACCTTCAA GGCCAAACTA TGCAGGACCC TTTTGGAGAG AAGCGGGGCC
661ACTTTGACTA CCAGTCCCTC TTGATGCGCC TGGGACTGAT ACGTCAGAAA GTGCTGGAGA
721GGCTCCATAA TGAGAATGCA GAAATGGACT CTGATAGCAG TTCATCTGGG ACAGAGACAG
781ACCTTCATGG GAGCCTGAGG GTTTACCCAA CTTTCTTGTA CAAAGTGGTT GATATCGGTA
841AGCCTATCCC TAACCCTCTC CTCGGTCTCG ATTCTACGTA GTAATGAACT AGCCCGTAAC
901TTGAAAGTAT TTCGATTTCT TGGCTTTATA TATCTTGTGG AAAGGACGAT AATAATCCCC
961TCTGATATAT GACACGCGTT AAGTCgacaa tcaacctctg gattacaaaa tttgtgaaag
1021att

Download FASTA (ORF) (Full)