Construct: ORF TRCN0000479301

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF001142.1_s317c1
Derived from:
ccsbBroadEn_08748
DNA Barcode:
ACAAGATATTAACGCTCGGCTGGA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
FAM234B (57613)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000479301
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 57613 FAM234B family with sequence simila... NM_020853.2 99.7% 99.8% (many diffs)
2 mouse 74525 Fam234b family with sequence simila... NM_028982.4 85% 87% (many diffs)
3 mouse 74525 Fam234b family with sequence simila... XM_006506715.2 83.7% 85.6% (many diffs)
4 mouse 74525 Fam234b family with sequence simila... XM_017321794.1 69.2% 70.6% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1935
ORF length:
1866
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat ggcgaccgtg ctgtccaggg cgctcaagct gccggggaag aagagcccag
121acctagggga gtatgatcca cttacccagg ctgacagtga tgagagcgaa gacgatctgg
181tgcttaacct gcagaagaat ggaggggtca aaaatgggaa gagtcctttg ggagaagcgc
241cagaacccga ctcagatgct gaggttgcag aggctgcaaa gccacatctt tcagaagtca
301ccacggaggg ctacccctca gaaccccttg ggggcctgaa acagaaggcg gcctcctccc
361tggtgtcata tgtgcgcacg tctgtcttcc tgctgacttt ggggatctcg atgatcctgg
421tgctcctgtg tgctttcctg atcccctgtc ctcccagaga tctgcacagc acctggagcc
481gccacttggg ctcccaggga ggtggggacc tgtctccatt ggaattggct gatgtgaatg
541gagatggcct gcgtgatgtg cttctctcct ttgtgatgtc aaggaacggg agtgcagtag
601gtgtctcaag accagctgct aatcttgtgt gcctttcggg gatgaatggc agcacactgt
661ggtctagtct tctccctgag gaggctcgag atatcacatg tttggagctg atgccaggaa
721gcttggctga aaccatctgc cttgtgacag ggacacacaa gatgctcagc gcattcaatg
781caacgtcagg gaaagccatt tggactttaa acccaaacta cttgtccaac ggtaccttgg
841ctgccccagt tgtggtactg ccagacttgg atgaagacgg tgttcgagac cttgtggttc
901tggccattgg ggaattgcag ccagatctgt gctttctgct ggtgtctggc cggaccggaa
961atccagtggg tcgacctgtg aagtacaaca tcgttggagt tgggaatctg attggtcctc
1021aggtttacat caccacaaat ggggctgtct acatcctgtt tggctttgga aatatacaag
1081ctgtcgcact gcgggacatt tttgttcagg cccaaaatcg agacagctca ccaccttctc
1141tgcagataga agagccagaa tgggaaaagc gaagatccat caacctgtct gagctcattg
1201atgtttacag tgatggtgtt gaactactcc agatggtgaa ggcaccagat tccaactgca
1261gcaaccttct gattacaacc agacaaagcc ttgtgctgct tcgggggcaa aatctgacac
1321cttactgggc attgagactt caaggcctgc gcagccagcc tactcctgga tatttcactg
1381atgatcagac attagacttc cttctgcaga tacaggatgg agttgggatg aaaaagatga
1441tggttgtgga tggtgactct ggctccattg tttggagtta ccgtgctccg tgtcacatga
1501aagaaacgcc agccacctca gcagttactt cagaccagaa gtctgtcttc ctcttctggg
1561ccgaagggct gtcagctgca tctcccaatT CCGATATCAT CCTAGGAACT GAGCCGCCCA
1621GCCTTCACCA CCTTTACCTC CTGCATCCTG CGTTCCCCTC CATCCTTCTG GATCTGGCCA
1681ACACCACCGG CACAGTGACG GCTTCAGAGG TTGGAATTAA CGACCTCTGG AAAGATGCCT
1741TTTATGTTAC CAGGACAACA GGGCCAAGCT CAGAAGGCCA TCCAGCAGCC CTGGTGGTCA
1801GCAAGCTTAG TCTACGGTGG GCACTAATGG AGGGCCAGAT GGCTCAGCTA CAGGAGTCCA
1861CCCCCAAAAT TGGCCGTGGG GAGCTGCGAA GATTTCTCTC TAGGATAAAG TTTGTTGAAG
1921CTCCCTACGA GATCTTGCCA ACTTTCTTGT ACAAAGTGGT TGATATCGGT AAGCCTATCC
1981CTAACCCTCT CCTCGGTCTC GATTCTACGT AGTAATGAAC TAGTCCGTAA CTTGAAAGTA
2041TTTCGATTTC TTGGCTTTAT ATATCTTGTG GAAAGGACGA ACAAGATATT AACGCTCGGC
2101TGGAACGCGT TAAGTCgaca atcaacctct ggattacaaa atttgtgaaa gatt

Download FASTA (ORF) (Full)