Construct: ORF TRCN0000479898

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF016080.1_s317c1
Derived from:
ccsbBroadEn_00025
DNA Barcode:
TTAACCAATCCCAATATTTGCCAA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ADCYAP1 (116)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000479898
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 116 ADCYAP1 adenylate cyclase activatin... NM_001099733.2 100% 100%
2 human 116 ADCYAP1 adenylate cyclase activatin... NM_001117.5 100% 100%
3 human 116 ADCYAP1 adenylate cyclase activatin... XM_005258081.4 55.8% 55.8% 1_417del
4 mouse 11516 Adcyap1 adenylate cyclase activatin... NM_001315503.1 85% 82.3% (many diffs)
5 mouse 11516 Adcyap1 adenylate cyclase activatin... NM_009625.3 85% 82.3% (many diffs)
6 mouse 11516 Adcyap1 adenylate cyclase activatin... XM_006523498.3 78.1% 74.3% (many diffs)
7 mouse 11516 Adcyap1 adenylate cyclase activatin... XM_006523499.3 64.3% 58.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
597
ORF length:
528
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat gaccatgtgt agcggagcga ggctggccct gctggtctat gggataatca
121tgcacagcag cgtctacagc tcacctgccg ccgccggact ccggttcccc gggatcaggc
181cagaggaaga ggcgtacggc gaggacggaa acccgctgcc agacttcgat ggctcggagc
241cgccgggcgc agggagcccc gccTCCGCGC CGCGCGCCGC CGCCGCCTGG TACCGCCCGG
301CCGGGAGAAG AGATGTCGCC CACGGGATCC TTAACGAGGC CTACCGCAAA GTGCTGGACC
361AGCTGTCCGC CGGGAAGCAC CTGCAGTCGC TCGTGGCCCG GGGCGTGGGT GGGAGCCTCG
421GCGGCGGCGC GGGGGACGAC GCGGAGCCGC TCTCCAAGCG CCACTCGGAC GGGATCTTCA
481CGGACAGCTA CAGCCGCTAC CGGAAACAAA TGGCTGTCAA GAAATACTTG GCGGCCGTCC
541TAGGGAAGAG GTATAAACAA AGGGTTAAAA ACAAAGGACG CCGAATAGCT TATTTGTTGC
601CAACTTTCTT GTACAAAGTG GTTGATATCG GTAAGCCTAT CCCTAACCCT CTCCTCGGTC
661TCGATTCTAC GTAGTAATGA ACTAGTCCGT AACTTGAAAG TATTTCGATT TCTTGGCTTT
721ATATATCTTG TGGAAAGGAC GATTAACCAA TCCCAATATT TGCCAAACGC GTTAAGTCga
781caatcaacct ctggattaca aaatttgtga aagatt

Download FASTA (ORF) (Full)