Construct: ORF TRCN0000480277

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF002483.1_s317c1
Derived from:
ccsbBroadEn_11526
DNA Barcode:
AGCCAAAAGTAGGCTAGTCCGGTC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TXNRD2 (10587)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000480277
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 10587 TXNRD2 thioredoxin reductase 2 NM_001352301.1 99.4% 99.7% 1019T>C;1116G>A;1477_1482delTGAGGG
2 human 10587 TXNRD2 thioredoxin reductase 2 NM_001352300.2 93.8% 93.4% (many diffs)
3 human 10587 TXNRD2 thioredoxin reductase 2 NM_006440.5 93.6% 93.2% (many diffs)
4 human 10587 TXNRD2 thioredoxin reductase 2 NM_001352302.1 86% 86.3% (many diffs)
5 human 10587 TXNRD2 thioredoxin reductase 2 NR_147957.2 71.7% (many diffs)
6 human 10587 TXNRD2 thioredoxin reductase 2 NM_001352303.1 59.7% 58.1% (many diffs)
7 human 10587 TXNRD2 thioredoxin reductase 2 NM_001282512.3 56.5% 54.4% (many diffs)
8 mouse 26462 Txnrd2 thioredoxin reductase 2 NM_013711.3 78.7% 80.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1545
ORF length:
1476
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat ggaggaccaa gcaggtcagc gggactatga tctcctggtg gtcggcgggg
121gatctggtgg cctggcttgt gccaaggagg ccgcccagct gggaaggaag gtggccgtgg
181tggactacgt ggaaccttct ccccaaggca cccggtgggg cctcggcggc acctgcgtca
241acgtgggctg catccccaag aagctgatgc accaggcggc actgctggga ggcctgatcc
301aagatgcccc caactatggc tgggaggtgg cccagcccgt gccgcatgac tggaggaaga
361tggcagaagc tgttcaaaat cacgtgaaat ccttgaactg gggccaccgt gtccagcttc
421aggacagaaa agtcaagtac tttaacatca aagccagctt tgttgacgag cacacggttt
481gcggcgttgc caaaggtggg aaagagattc tgctgtcagc cgatcacatc atcattgcta
541ctggagggcg gccgagatac cccacgcaca tcgaaggtgc cttggaatat ggaatcacaa
601gtgatgacat cttctggctg aaggaatccc ctggaaaaac gttggtggtc ggggccagct
661atgtggccct ggagtgtgct ggcttcctca ccgggattgg gctggacacc accatcatga
721tgcgcagcat ccccctccgc ggcttcgacc agcaaatgtc ctccatggtc atagagcaca
781tggcatctca tggcacccgg ttcctgaggg gctgtgcccc ctcgcgggtc aggaggctcc
841ctgatggcca gctgcaggtc acctgggagg acagcaccac cggcaaggag gacacgggca
901cctttgacac cgtcctgtgg gccataggtc gagtcccaga caccagaagt ctgaatttgg
961agaaggctgg ggtagatact agccccgaca ctcagaagat cctggtggac tcccgggaag
1021ccacctctgt gccccacatc tacgccattg gtgacgtggt ggaggggcgg cctgagctga
1081cacccacagc gatcatggcc gggaggctcc tggtgcagcg gctcttcggc gggtcctcag
1141atctgatgga ctacgacaat gttcccacga CCGTCTTCAC CCCACTGGAG TATGGCTGTG
1201TGGGGCTGTC CGAGGAGGAG GCAGTGGCTC GCCACGGGCA GGAGCATGTT GAGGTCTATC
1261ACGCCCATTA TAAACCACTG GAGTTCACGG TGGCTGGACG AGATGCATCC CAGTGTTATG
1321TAAAGATGGT GTGCCTGAGG GAGCCCCCAC AGCTGGTGCT GGGCCTGCAT TTCCTTGGCC
1381CCAACGCAGG CGAAGTTACT CAAGGATTTG CTCTGGGGAT CAAGTGTGGG GCTTCCTATG
1441CGCAGGTGAT GCGGACCGTG GGTATCCATC CCACATGCTC TGAGGAGGTA GTCAAGCTGC
1501GCATCTCCAA GCGCTCAGGC CTGGACCCCA CGGTGACAGG CTGCTTGCCA ACTTTCTTGT
1561ACAAAGTGGT TGATATCGGT AAGCCTATCC CTAACCCTCT CCTCGGTCTC GATTCTACGT
1621AGTAATGAAC TAGTCCGTAA CTTGAAAGTA TTTCGATTTC TTGGCTTTAT ATATCTTGTG
1681GAAAGGACGA AGCCAAAAGT AGGCTAGTCC GGTCACGCGT TAAGTCgaca atcaacctct
1741ggattacaaa atttgtgaaa gatt

Download FASTA (ORF) (Full)