Construct: ORF TRCN0000480413

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF007589.1_s317c1
Derived from:
ccsbBroadEn_10098
DNA Barcode:
CGCGACATGGGCCGTTCCCAATAT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
OR6B2 (389090)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000480413
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 389090 OR6B2 olfactory receptor family 6... NM_001005853.1 99.8% 100% 919T>C
2 human 150681 OR6B3 olfactory receptor family 6... NM_173351.1 90.3% 89.1% (many diffs)
3 human 150681 OR6B3 olfactory receptor family 6... XM_011510671.2 68.3% 67.3% (many diffs)
4 mouse 259040 Olfr1416 olfactory receptor 1416 NM_147038.1 86.2% 85.8% (many diffs)
5 mouse 259041 Olfr1414 olfactory receptor 1414 NM_147039.2 85.5% 86.8% (many diffs)
6 mouse 258228 Olfr1415 olfactory receptor 1415 NM_001011525.1 85.3% 85.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1005
ORF length:
936
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat gagtggggag aatgtcacca aggtcagcac cttcatcctg gtgggcctcc
121ccacggcccc agggctgcag tacctgctct tcctcctctt cctgctcacc tacctctttg
181tcctggtgga gaacctggcc atcatcctca tcgtctggag cagcacctcc ctccacaggc
241ccatgtacta ctttctgagc tccatgtctt tcctggagat ctggtacgtg tctgacatca
301cccccaagat gctggagggc ttcctcctcc agcagaaacg catctctttc gtcgggtgca
361tgacgcagct ctacttcttc agctccctgg tgtgcaccga gtgtgtgctt ctggcctcca
421tggcctacga ccgctacgtg gccatctgcc acccgctgcg ctaccacgtc cttgtgaccc
481cggggctgtg cctccagctg gtgggcttct cctttgtgag tggcttcacc atctccatga
541tcaaggtctg ttttatctcc agcgtcacgt tctgtggctc caacgtcttg aaccacttct
601tctgtgacat ttcccccatc ctcaagctgg cctgcacgga cttcTCCACT GCAGAGCTGG
661TGGATTTCAT CCTGGCCTTC ATCATCCTGG TGTTTCCGCT CCTGGCCACC ATACTGTCAT
721ATTGGCACAT CACCCTGGCT GTCCTGCGCA TCCCCTCGGC CACCGGCTGC TGGAGAGCCT
781TCTCTACCTG CGCCTCTCAC CTCACCGTGG TCACCGTCTT CTATACAGCC TTGCTTTTCA
841TGTATGTCCG GCCCCAAGCC ATTGATTCCC AGAGCTCCAA CAAGCTCATC TCTGCCGTGT
901ACACTGTTGT CACGCCAATA ATTAACCCTT TGATTTACTG CCTGAGGAAC AAGGAATTTA
961AGGACGCCTT GAAAAAGGCC TTGGGCCTGG GTCAAACTTC ACACTTGCCA ACTTTCTTGT
1021ACAAAGTGGT TGATATCGGT AAGCCTATCC CTAACCCTCT CCTCGGTCTC GATTCTACGT
1081AGTAATGAAC TAGTCCGTAA CTTGAAAGTA TTTCGATTTC TTGGCTTTAT ATATCTTGTG
1141GAAAGGACGA CGCGACATGG GCCGTTCCCA ATATACGCGT TAAGTCgaca atcaacctct
1201ggattacaaa atttgtgaaa gatt

Download FASTA (ORF) (Full)