Construct: ORF TRCN0000480908

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF005012.1_s317c1
Derived from:
ccsbBroadEn_04902
DNA Barcode:
CCACGTCTGATCGATGGACCGGAC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
OR6B1 (135946)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000480908
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 135946 OR6B1 olfactory receptor family 6... NM_001005281.2 100% 100%
2 mouse 259067 Olfr449 olfactory receptor 449 NM_147064.1 86.2% 92.6% (many diffs)
3 mouse 259067 Olfr449 olfactory receptor 449 XM_011241361.1 86.2% 92.6% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1002
ORF length:
933
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat ggagttggag aaccagacac gagtcaccaa gttcattctg gtgggattcc
121ctgggagctt gagtatgcgg gcagccatgt ttctgatatt ccttgtggcc tatattctga
181cagtggctga aaacgtgatc atcatcctat tggtgctgca aaatcggcca ctgcacaagc
241ctatgtactt cttcctggcc aacctgtcct tcttggagac ctggtacatc tctgtgactg
301tgcccaagtt actgtttagt ttttggtctg tgaacaacag catctctttc acactctgta
361tgatacaact gtacttcttc attgctctca tgtgcacaga atgtgtgctt ctggccgcca
421tggcctatga ccggtatgtg gccatctgtc gcccactcca ctacccaacc ataatgagcc
481atgggctctg cttccgcctc gctcttggtt cctgggccat tggctttggc atctccctgg
541cgaagatcta cttcatctcc tgcctcagct tctgtggtcc caatgtcaTC AACCACTTCT
601TCTGTGACAT CTCTCCAGTA CTTAATCTCT CCTGCACAGA CATGTCCATA ACTGAGTTGG
661TAGACTTTAT CCTGGCACTG GTCATCTTCC TATTCCCACT CTTTATTACT GTCCTGTCCT
721ACGGATGCAT TCTGGCCACC ATATTATGCA TGCCCACAGG AAAGCAGAAA GCGTTCTCCA
781CTTGTGCCTC CCATCTTGTG GTGGTCACCA TTTTCTATTC AGCCATTATT TTCATGTATG
841CTCGACCTCG AGTTATCCAT GCCTTCAACA TGAACAAAAT TATTTCCATC TTCTATGCCA
901TTGTCACTCC TTCTCTCAAC CCTTTCATTT ATTGCCTAAG AAACCGAGAG GTCAAGGAAG
961CTCTGAAGAA ACTGGCATAT TGCCAGGCCA GCAGATCTGA CTTGCCAACT TTCTTGTACA
1021AAGTGGTTGA TATCGGTAAG CCTATCCCTA ACCCTCTCCT CGGTCTCGAT TCTACGTAGT
1081AATGAACTAG TCCGTAACTT GAAAGTATTT CGATTTCTTG GCTTTATATA TCTTGTGGAA
1141AGGACGACCA CGTCTGATCG ATGGACCGGA CACGCGTTAA GTCgacaatc aacctctgga
1201ttacaaaatt tgtgaaagat t

Download FASTA (ORF) (Full)