Construct: ORF TRCN0000480943

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF004959.1_s317c1
Derived from:
ccsbBroadEn_11361
DNA Barcode:
ATCACACGCGCCGTCGGAGTTCGT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
PPIG (9360)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000480943
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 9360 PPIG peptidylprolyl isomerase G NM_004792.3 97.9% 97.8% 240_284del;1335T>A
2 human 9360 PPIG peptidylprolyl isomerase G XM_005246966.2 97.9% 97.8% 240_284del;1335T>A
3 human 9360 PPIG peptidylprolyl isomerase G XM_005246967.1 97.9% 97.8% 240_284del;1335T>A
4 human 9360 PPIG peptidylprolyl isomerase G XM_017005302.2 33% 31.8% (many diffs)
5 mouse 228005 Ppig peptidyl-prolyl isomerase G... NM_001081086.1 87.8% 90.9% (many diffs)
6 mouse 228005 Ppig peptidyl-prolyl isomerase G... XM_006499184.3 87.8% 90.9% (many diffs)
7 mouse 228005 Ppig peptidyl-prolyl isomerase G... XM_006499185.3 87.8% 90.9% (many diffs)
8 mouse 228005 Ppig peptidyl-prolyl isomerase G... XM_006499186.2 87.8% 90.9% (many diffs)
9 mouse 228005 Ppig peptidyl-prolyl isomerase G... XM_006499187.3 87.8% 90.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
2286
ORF length:
2217
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat gggaataaag gttcaacgtc ctcgatgttt ttttgacatt gccattaaca
121atcaacctgc tggaagagtt gtctttgaat tattttctga tgtgtgcccc aaaacatgcg
181agaactttcg ttgtctttgt acaggtgaaa aggggaccgg gaaatcaact cagaaaccat
241tacattataa gagttgtctc tttcacagag ttgtcaagga ttttatggtt caaggtggtg
301acttcagtga agacgagagt ttcgctgtta aacacaacaa agaatttctc ttgtcaatgg
361ccaacagagg gaaggataca aatggttcac agttcttcat aacaacgaaa ccaactcctc
421atttagatgg gcatcatgtt gtttttggac aagtaatctc tggtcaagaa gttgtaagag
481agattgaaaa ccagaaaaca gatgcagcta gcaaaccgtt tgcggaggta cggatactca
541gttgtggaga gctgattccc aaatctaaag ttaagaaaga agaaaagaaa aggcataaat
601catcatcatc ttcctcctcc tcatctagtg actcagatag ctcaagtgat tctcagtcct
661cttctgattc ctctgattcc gaaagtgcta ctgaagagaa atcaaagaaa agaaaaaaga
721aacatcggaa aaattcccga aaacacaaga aagaaaagaa aaagcgaaag aaaagcaaga
781agagtgcatc tagtgagagt gaagctgaaa atcttgaagc acaaccccag tctactgtcc
841gtccagaaga gatccctcct atacctgaaa atagattcct aatgagaaaa agtcctccta
901aagctgatga gaaggaaagg aaaaacagag agagagaaag ggaaagagag tgtaatccac
961ctaactccca gcctgcttca taccagagac gacttttagt tactagatct ggcaggaaaa
1021ttaaaggaag aggaccaagg cgttatcgaa ctccttccag atccagatca agggatcgtt
1081tcagacgtag tgagactcct ccacattgga ggcaagagat gcagagagct caaagaatga
1141gggtatcaag tggtgaaaga tggatcaagg gggataagag tgagttgaat gaaataaaag
1201aaaatcagag aagtccagtt agagtaaaag agagaaaaat aacagatcac aggaatgtat
1261ctgagagtcc aaacagaaaa aatgaaaagg agaagaaagt taaagaccat aaatctaaca
1321gcaaagagag agacatcaga agaaattcag aaaaagaaga caagtataaa aacaaagtga
1381agaaaagggc caaatctaaa agtaggagta agagcaaaga gaaatcaaag agtaaagaaa
1441gagattcaaa acataataga aatgaagaaa agaggatgag gtcaaggagt aaaggaaggg
1501atcatgaaaa tgttaaagaa aaagaaaagc agtctgattc taaaggaaaa gatcaggaaa
1561ggagtagaag taaagagaag tctaaacagt tagaatcaaa gagtaatgag catgatcaca
1621gtaaaagtaa ggaaaaggat agacgcgcac aatccaggag tagagaatgt gatataacta
1681aaggtaaaca cagttataat agcagaacaa gagaacgaag cagaagtagg gacagaagca
1741gaagagtgcg atcaagaacc catgacagag atcgcagcag aagcaaggag taCCATAGAT
1801ACAGAGAACA GGAATACAGG AGAAGAGGAC GGTCACGAAG CCGAGAGAGA AGAACACCAC
1861CAGGAAGATC AAGAAGTAAA GATAGGAGGA GAAGGAGGAG AGACTCACGG AGCTCAGAGA
1921GAGAAGAAAG TCAAAGCAGA AACAAAGACA AATACAGAAA CCAAGAGAGT AAGAGCTCAC
1981ACAGAAAAGA AAATTCTGAG AGTGAGAAAA GAATGTACTC TAAAAGTCGT GATCATAATA
2041GCTCAAATAA CAGCAGGGAA AAAAAGGCTG ATAGAGATCA AAGTCCCTTC TCAAAAATAA
2101AACAAAGCAG TCAGGACAAT GAATTAAAGT CCTCCATGTT GAAAAATAAG GAGGATGAGA
2161AGATCAGATC CTCAGTGGAA AAAGAAAACC AAAAATCAAA AGGTCAAGAA AATGACCATG
2221TACATGAAAA AAATAAAAAA TTTGATCATG AATCAAGCCC TGGAACAGAT GAAGACAAAA
2281GCGGATTGCC AACTTTCTTG TACAAAGTGG TTGATATCGG TAAGCCTATC CCTAACCCTC
2341TCCTCGGTCT CGATTCTACG TAGTAATGAA CTAGTCCGTA ACTTGAAAGT ATTTCGATTT
2401CTTGGCTTTA TATATCTTGT GGAAAGGACG AATCACACGC GCCGTCGGAG TTCGTACGCG
2461TTAAGTCgac aatcaacctc tggattacaa aatttgtgaa agatt

Download FASTA (ORF) (Full)

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