Construct: ORF TRCN0000481109

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF010227.1_s317c1
Derived from:
ccsbBroadEn_07048
DNA Barcode:
CTGGTAAAGACATGTTTGCATAGC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TF (7018)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000481109
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 7018 TF transferrin NM_001063.4 99.7% 99.4% (many diffs)
2 human 7018 TF transferrin NM_001354703.2 93.4% 93.1% (many diffs)
3 human 7018 TF transferrin NM_001354704.2 81.5% 81.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2160
ORF length:
2094
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgag gctcgccgtg ggagccctgc tggtctgcgc cgtcctgggg ctgtgtctgg
121ctgtccctga taaaactgtg agatggtgtg cagtgtcgga gcatgaggcc actaagtgcc
181agagtttccg cgaccatatg aaaagcgtca ttccatccga tggtcccagt gttgcttgtg
241tgaagaaagc ctcctacctt gattgcatca gggccattgc ggcaaacgaa gcggatgctg
301tgacactgga tgcaggtttg gtgtatgatg cttacctggc tcccaataac ctgaagcctg
361tggtggcaga gttctatggg tcaaaagagg atccacagac tttctattat gctgttgctg
421tggtgaagaa ggatagtggc ttccagatga accagcttcg aggcaagaag tcctgccaca
481cgggtctagg caggtccgct gggtggaaca tccccatagg cttactttac tgtgacttac
541ctgagccacg taaacctctt gagaaagcag tggccaattt cttctcgggc agctgtgccc
601cttgtgcgga tgggacggac ttcccccagc tgtgtcaact gtgtccaggg tgtggctgct
661ccacccttaa ccaatacttc ggctactcag gagccttcaa gtgtctgaag aatggtgctg
721gggatgtggc ctttgtcaag cactcgacta tatttgagaa cttggcaaac aaggctgaca
781gggaccagta tgagctgctt tgcctggaca acacccggaa gccggtagat gaatacaagg
841actgccactt ggcccaggtc ccttctcata ccgtcgtggc ccgaagtatg ggcggcaagg
901aggacttgat ctgggagctt ctcaaccagg cccaggaaca ttttggcaaa gacaaatcaa
961aagaattcca actattcagc tctcctcatg ggaaggacct gctgtttaag gactctgccc
1021acgggttttt aaaagtcccc cccaggatgg atgccaagat gtacctgggc tatgagtatg
1081tcactgccat ccggaatcta cgggaaggca catgccaaga agccccaaca gatgaatgca
1141agcctgtgaa gtggtgtgcg ctgagccacc acgagaggct caagtgtgat gagtggagtg
1201ttaacagtgt agggaaaata gagtgtgtat cagcagagac caccgaagac tgcatcgcca
1261agatcatgaa tggagaagct gatgccatga gcttggatgg agggtttgtc tacatagcgg
1321gcaagtgtgg tctggtgccn gtcttggcag aaaactacaa taagagcgat aattgtgagg
1381atacaccaga ggcagggtat tttgctgtag cagtggtgaa gaaatcagct tctgacctca
1441cctgggacaa tctgaaaggc aagaagtcct gccatacggc agttggcaga accgctggct
1501ggaacatccc catgggcctg ctctacaata agatcaacca ctgcagattt gatgaatttt
1561tcagtgaagg ttgtgcccct gggtctaaga aagactccag tctctgtaag ctgtgtatgg
1621gctcaggcct aaacctgtgt gaacccaaca acaaagaggg atactacggc tacacaggcg
1681ctttcaggtg tctggttgag aagggagatg tggcctttgt gaaacaccag actgtcccac
1741agaacactgg gggaaaaaac cctgatccat gggctaagaa tcTGAATGAA AAAGACTATG
1801AGTTGCTGTG CCTTGATGGT ACCAGGAAAC CTGTGGAGGA GTATGCGAAC TGCCACCTGG
1861CCAGAGCCCC GAATCACGCT GTGGTCACAC GGAAAGATAA GGAAGCTTGC GTCCACAAGA
1921TATTACGTCA ACAGCAGCAC CTATTTGGAA GCAACGTAAC TGACTGCTCG GGCAACTTTT
1981GTTTGTTCCG GTCGGAAACC AAGGACCTTC TGTTCAGAGA TGACACAGTA TGTTTGGCCA
2041AACTTCATGA CAGAAACACA TATGAAAAAT ACTTAGGAGA AGAATATGTC AAGGCTGTTG
2101GTAACCTGAG AAAATGCTCC ACCTCATCAC TCCTGGAAGC CTGCACTTTC CGTAGACCTT
2161ACCCAACTTT CTTGTACAAA GTGGTTGATA TCGGTAAGCC TATCCCTAAC CCTCTCCTCG
2221GTCTCGATTC TACGTAGTAA TGAACTAGTC CGTAACTTGA AAGTATTTCG ATTTCTGGCT
2281TTATATATCT TGTGGAAAGG ACGACTGGTA AAGACATGTT TGCATAGCAC GCGTTAAGTC
2341gacaatcaac ctctggatta caaaatttgt gaaagatt

Download FASTA (ORF) (Full)

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