Construct: ORF TRCN0000481550
Construct Description:
- Construct Type:
- ORF
- Other Identifiers:
- ORF004293.2_s317c1
- Derived from:
- ccsbBroadEn_07893
- DNA Barcode:
- AGATGATATCTCGAATGAATTAGG
- Epitope Tag:
- V5
- Notes:
- No stop codon in insert
Originally Annotated References:
- Gene:
- MORC3 (23515)
Vector Information:
- Vector Backbone:
- pLX_317
- Pol II Cassette 1:
- SV40-PuroR
- Pol II Cassette 2:
- EF1a-TRCN0000481550
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
- Epitope Tag:
- V5
Current transcripts matched by this ORF:
| Taxon | Gene | Symbol | Description | Transcript | Nuc. Match %[?]A simple nucleotide-based global alignment percentage, calculated as follows: total nt. matches ---------------------------------- aligned length (incl. gaps) |
Prot. Match %[?]A simple amino acid-based global alignment percentage, calculated as follows: total aa. matches ---------------------------------- aligned length (incl. gaps) |
Match Diffs[?]This field may contain sequence annotations in HGVS format. For more information about HGVS annotations, please refer to the HGVS Quick Reference Guide. | |
|---|---|---|---|---|---|---|---|---|
| 1 | human | 23515 | MORC3 | MORC family CW-type zinc fi... | NM_015358.3 | 99.8% | 99.8% | 1724A>G;1863G>A;2172C>A |
| 2 | human | 23515 | MORC3 | MORC family CW-type zinc fi... | NM_001320445.1 | 92.3% | 92.3% | (many diffs) |
| 3 | human | 23515 | MORC3 | MORC family CW-type zinc fi... | NM_001320446.1 | 92.3% | 92.3% | (many diffs) |
| 4 | human | 23515 | MORC3 | MORC family CW-type zinc fi... | XM_011529518.2 | 92.3% | 92.3% | (many diffs) |
| 5 | human | 23515 | MORC3 | MORC family CW-type zinc fi... | XM_017028311.1 | 92.3% | 92.3% | (many diffs) |
| 6 | human | 23515 | MORC3 | MORC family CW-type zinc fi... | XM_017028312.1 | 58.9% | 58.9% | (many diffs) |
Sequence Information
Note: uppercase bases indicate empirically verified sequence.
- ORF start:
- 69
- ORF end:
- 2886
- ORF length:
- 2817
- Sequence:
-
1 tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag 61 ttggcaccat ggcggcgcag ccaccccgcg ggatacgcct cagcgcgctt tgcccgaagt 121 ttttacatac aaattctact agtcacacct ggccattcag tgcagttgct gaattaatag 181 ataatgctta tgatcctgat gtgaacgcta aacaaatatg gattgacaaa acagtgataa 241 atgaccatat atgcttgaca ttcaccgaca atgggaatgg tatgacttct gataaattac 301 ataaaatgct aagctttggc ttcagtgaca aagtcaccat gaatggtcat gtcccagttg 361 gattatatgg gaatggcttc aagtcgggtt ctatgcgtct gggtaaagac gcaatcgttt 421 ttaccaaaaa tggagaaagc atgagcgtgg gccttttgtc tcagacctac ttggaagtca 481 taaaagcgga gcatgttgtt gttccaatag tggcattcaa caagcaccga cagatgatta 541 atttagcaga atcaaaagcc agccttgctg caattctgga acattctctg ttttccacgg 601 aacagaagtt actggcagaa cttgatgcta ttataggcaa gaaggggacg aggatcatca 661 tttggaatct tagaagctac aaaaatgcaa cagagttcga ttttgaaaag gataaatatg 721 atatcagaat tcccgaggat ttagatgaga taacagggaa gaaggggtac aagaagcagg 781 aaaggatgga ccagattgcc cctgagagtg actattccct gagggcttat tgcagtatat 841 tatatctaaa gccaagaatg cagatcatcc tacgtggaca gaaagtgaag acacagctgg 901 tttcgaagag tcttgcctac atcgaacgtg atgtttatcg accaaaattt ttatctaaaa 961 cagtgagaat tacctttgga ttcaactgca gaaataaaga tcattatggg ataatgatgt 1021 atcacagaaa tagactcatc aaagcttatg aaaaagttgg atgtcagtta agggcaaaca 1081 acatgggtgt tggagtggtt ggaattatag agtgtaattt ccttaagcca actcataata 1141 aacaagattt cgactatact aatgagtaca gacttacaat aacagcacta ggagaaaagc 1201 tgaatgatta ctggaatgaa atgaaagtga agaaaaatac agaatatcct ctaaatttgc 1261 cagttgaaga tatacagaag cgtcctgatc agacatgggt tcagtgtgat gcctgtctaa 1321 agtggcggaa attacctgat gggatggatc aacttcctga aaaatggtat tgctccaata 1381 accctgaccc acagttcaga aattgtgagg ttccagaaga acctgaagat gaggatttgg 1441 tacatcccac ttatgaaaaa acctacaaaa agaccaacaa ggaaaaattc aggatcagac 1501 aaccggaaat gatccctcgg attaatgctg aactgttgtt tcggccaact gctctttcaa 1561 ctccaagctt ttcttctcct aaggaaagtg ttccaagaag acatctttca gaaggaacaa 1621 attcttatgc gacaagactt ctaaataatc atcaagttcc acctcagtct gaacctgaga 1681 gcaacagctt gaaacggaga ctttctactc gttcctcaat tttgaatgca aagaatcgga 1741 gattgagtag tcagtttgaa aattcagttt ataaaggtga tgatgatgat ggagatgtca 1801 tcatcttaga agaaaacagt acccccaaac ctgcagtaga tcatgatatt gacatgaaat 1861 cagaacagag tcacgttgag caaggtggtg ttcaggttga gtttgtgggt gacagtgaac 1921 cttgtggcca aactggttca acaagcacct catcatcccg atgcgaccag ggaaatactg 1981 cagctaccca gactgaagta ccaagtttag ttgttaaaaa agaagaaact gttgaagacg 2041 agatagacgt aagaaatgat gcagtgattc tgccctcctg tgtagaagct gaagcaaaga 2101 tacatgaaac ccaggaaacc accgataaat ctgcagatga tgcaggctgc caattacaag 2161 aactgagaaa ccagctactc cttgtcactg aggaaaaaga gaattataaa agacagtgtc 2221 atatgtttac tgatcaaata aaagtgttac aacagaggat actagaaatg aatgacaagt 2281 atgttaagaa agaaacttgc catcagtcca ctgaaaccga tgctgtattt ttacttgaaa 2341 gtattaatgg caaatctgaa agtccagacc atatggtatc tcagtatcag caagctttGG 2401 AAGAAATAGA AAGGCTGAAA AAACAATGTA GTGCTTTGCA ACATGTAAAG GCTGAATGCA 2461 GCCAGTGTTC CAATAATGAG AGTAAAAGTG AAATGGATGA GATGGCTGTG CAGCTTGACG 2521 ATGTGTTTAG ACAACTGGAC AAATGCAGTA TTGAGAGGGA CCAGTATAAA AGTGAGGTTG 2581 AATTGCTGGA AATGGAAAAG TCACAAATCC GTTCACAGTG TGAAGAACTC AAAACTGAAG 2641 TAGAACAGTT AAAATCTACA AATCAACAGA CGGCAACAGA TGTTTCAACA TCAAGTAACA 2701 TTGAGGAGTC TGTAAATCAT ATGGATGGAG AAAGCCTCAA ACTCCGATCT CTTCGAGTTA 2761 ACGTAGGACA ACTGCTGGCT ATGATTGTGC CTGATCTTGA TCTTCAGCAA GTGAATTACG 2821 ATGTTGATGT AGTTGATGAG ATTTTAGGAC AAGTTGTTGA ACAAATGAGT GAAATCAGTA 2881 GTACTTTGCC AACTTTCTTG TACAAAGTGG TTGATATCGG TAAGCCTATC CCTAACCCTC 2941 TCCTCGGTCT CGATTCTACG TAGTAATGAA CTAGTCCGTA ACTTGAAAGT ATTTCGATTT 3001 CTTGGCTTTA TATATCTTGT GGAAAGGACG AAGATGATAT CTCGAATGAA TTAGGACGCG 3061 TTAAGTCgac aatcaacctc tggattacaa aatttgtgaa agatt